Literature DB >> 8786076

Validation of the determination of deltaF508 mutations of the cystic fibrosis gene in over 11 000 mouthwashes.

H G de Vries1, J M Collèe, M H van Veldhuizen, L Achterhof, C T Smit Sibinga, H Scheffer, C H Buys, L P ten Kate.   

Abstract

Mouthwashes can be used as a DNA resource for mutation detection and, because collection and DNA isolation is simple and cheap, they could in particular, be used for large numbers of samples. To determine the failure rate (the proportion of mouth samples in which no PCR product was obtained) and the specificity of buccal epithelial cell mutation detection in large numbers of samples, we collected mouthwashes and blood samples from 11 413 blood donors and tested the mouthwashes for the deltaF508 mutation, which has an estimated frequency Of 75% among cystic fibrosis chromosomes in The Netherlands. Blood samples were tested for the deltaF508 mutations only if the mutation was identified in the mouthwash or in the case of a failure to obtain PCR products. The sensitivity of the test was determined in mouthwashes of 75 deltaF508 carriers known from earlier family studies. These samples were offered blindly between the mouthwashes of the blood donors. Both specificity and sensitivity of the mouthwash procedure were 100%. The overall failure rate was 5.6%. This large figure was caused mainly by insufficient rinsing of the mouth in one particular blood bank. Exclusion of the results of this blood bank reduced the failure rate to 1.8%. Our results also confirmed that for a large number of samples the mouthwash procedure is suitable for mutation detection and, with proper instructions, can be used in community screening.

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Year:  1996        PMID: 8786076     DOI: 10.1007/bf02185766

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  4 in total

1.  Cystic fibrosis in the Netherlands.

Authors:  L P Ten Kate
Journal:  Int J Epidemiol       Date:  1977-03       Impact factor: 7.196

2.  Multiplex PCR amplification from the CFTR gene using DNA prepared from buccal brushes/swabs.

Authors:  B Richards; J Skoletsky; A P Shuber; R Balfour; R C Stern; H L Dorkin; R B Parad; D Witt; K W Klinger
Journal:  Hum Mol Genet       Date:  1993-02       Impact factor: 6.150

3.  Simple non-invasive method to obtain DNA for gene analysis.

Authors:  N Lench; P Stanier; R Williamson
Journal:  Lancet       Date:  1988-06-18       Impact factor: 79.321

4.  Mass screening for cystic fibrosis heterozygotes: two assay systems compared.

Authors:  A Gilfillan; R Axton; D J Brock
Journal:  Clin Chem       Date:  1994-02       Impact factor: 8.327

  4 in total
  5 in total

1.  Mitochondrial DNA diversity of present-day Aboriginal Australians and implications for human evolution in Oceania.

Authors:  Nano Nagle; Kaye N Ballantyne; Mannis van Oven; Chris Tyler-Smith; Yali Xue; Stephen Wilcox; Leah Wilcox; Rust Turkalov; Roland A H van Oorschot; Sheila van Holst Pellekaan; Theodore G Schurr; Peter McAllister; Lesley Williams; Manfred Kayser; R John Mitchell
Journal:  J Hum Genet       Date:  2016-12-01       Impact factor: 3.172

2.  Buccal cells DNA extraction to obtain high quality human genomic DNA suitable for polymorphism genotyping by PCR-RFLP and Real-Time PCR.

Authors:  Erika Calvano Küchler; Patricia Nivoloni Tannure; Priscila Falagan-Lotsch; Taliria Silva Lopes; Jose Mauro Granjeiro; Lidia Maria Fonte Amorim
Journal:  J Appl Oral Sci       Date:  2012 Jul-Aug       Impact factor: 2.698

3.  Utility of saliva and hair follicles in donor selection for hematopoietic stem cell transplantation and chimerism monitoring.

Authors:  Gurvinder Kaur; Neeraj Kumar; Ramya Nandakumar; Chowphi C Rapthap; Gaurav Sharma; Shekhar Neolia; Heena Kumra; Prateek Mahalwar; Abhinav Garg; Sunil Kumar; Jasmeet Kaur; Mrinali Hakim; Lalit Kumar; Narinder K Mehra
Journal:  Chimerism       Date:  2012 Jan-Mar

4.  Collection of genomic DNA by buccal swabs for polymerase chain reaction-based biomarker assays.

Authors:  A H Walker; D Najarian; D L White; J F Jaffe; P A Kanetsky; T R Rebbeck
Journal:  Environ Health Perspect       Date:  1999-07       Impact factor: 9.031

Review 5.  Biomarkers of Alzheimer's disease risk in peripheral tissues; focus on buccal cells.

Authors:  Maxime François; Wayne Leifert; Ralph Martins; Philip Thomas; Michael Fenech
Journal:  Curr Alzheimer Res       Date:  2014       Impact factor: 3.498

  5 in total

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