Literature DB >> 8764944

A proposed mechanism for the mutagenicity of 5-formyluracil.

E J Privat1, L C Sowers.   

Abstract

5-Formyluracil is a mutagenic base formed in DNA by oxidation of the thymine methyl group. Whereas the thymine methyl group is electron donating, the formyl group is electron withdrawing, predicting increased ionization of the N-3 imino proton under physiological conditions. The pKa values of a series of 5-substituted uracil and deoxyuridine derivatives have been measured. A linear relationship is observed between the electronic inductive property of the 5-substituent and the pKa value of the corresponding imino proton. The pKa value of 5-formyl-2'-deoxyuridine is close to that of the mutagenic nucleoside analogue 5-bromo-2'-deoxyuridine. In analogy with BrU, it is proposed that the mutagenicity of 5-formyluracil results from enhanced mispairing of the ionized form with guanine during DNA replication.

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Year:  1996        PMID: 8764944     DOI: 10.1016/0027-5107(96)00005-x

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  18 in total

1.  Proton transfer from C-6 of uridine 5'-monophosphate catalyzed by orotidine 5'-monophosphate decarboxylase: formation and stability of a vinyl carbanion intermediate and the effect of a 5-fluoro substituent.

Authors:  Wing-Yin Tsang; B McKay Wood; Freeman M Wong; Weiming Wu; John A Gerlt; Tina L Amyes; John P Richard
Journal:  J Am Chem Soc       Date:  2012-08-21       Impact factor: 15.419

2.  Identification by UV resonance Raman spectroscopy of an imino tautomer of 5-hydroxy-2'-deoxycytidine, a powerful base analog transition mutagen with a much higher unfavored tautomer frequency than that of the natural residue 2'-deoxycytidine.

Authors:  W Suen; T G Spiro; L C Sowers; J R Fresco
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

3.  5-Carboxylcytosine and Cytosine Protonation Distinctly Alter the Stability and Dehybridization Dynamics of the DNA Duplex.

Authors:  Brennan Ashwood; Paul J Sanstead; Qing Dai; Chuan He; Andrei Tokmakoff
Journal:  J Phys Chem B       Date:  2020-01-14       Impact factor: 2.991

4.  Fragmentation of deprotonated ions of oligodeoxynucleotides carrying a 5-formyluracil or 2-aminoimidazolone.

Authors:  Yinsheng Wang; Lijie Men; Shetty Vivekananda
Journal:  J Am Soc Mass Spectrom       Date:  2002-10       Impact factor: 3.109

5.  Synthesis of stable-isotope enriched 5-methylpyrimidines and their use as probes of base reactivity in DNA.

Authors:  Artur Burdzy; Katherine T Noyes; Victoria Valinluck; Lawrence C Sowers
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

6.  Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil.

Authors:  Masaru Tsunoda; Takeshi Sakaue; Satoko Naito; Tomoko Sunami; Naoko Abe; Yoshihito Ueno; Akira Matsuda; Akio Takénaka
Journal:  J Nucleic Acids       Date:  2010-10-07

7.  pH-Dependent configurations of a 5-chlorouracil-guanine base pair.

Authors:  Jacob A Theruvathu; Cherine H Kim; Agus Darwanto; Jonathan W Neidigh; Lawrence C Sowers
Journal:  Biochemistry       Date:  2009-12-01       Impact factor: 3.162

8.  Characterization of synthetic oligonucleotides containing biologically important modified bases by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Zhengfang Cui; Jacob A Theruvathu; Alvin Farrel; Artur Burdzy; Lawrence C Sowers
Journal:  Anal Biochem       Date:  2008-04-25       Impact factor: 3.365

9.  Substrate and mispairing properties of 5-formyl-2'-deoxyuridine 5'-triphosphate assessed by in vitro DNA polymerase reactions.

Authors:  M Yoshida; K Makino; H Morita; H Terato; Y Ohyama; H Ide
Journal:  Nucleic Acids Res       Date:  1997-04-15       Impact factor: 16.971

10.  Measurement of Postreplicative DNA Metabolism and Damage in the Rodent Brain.

Authors:  Jay P Patel; Mark L Sowers; Jason L Herring; Jacob A Theruvathu; Mark R Emmett; Bridget E Hawkins; Kangling Zhang; Douglas S DeWitt; Donald S Prough; Lawrence C Sowers
Journal:  Chem Res Toxicol       Date:  2015-11-24       Impact factor: 3.739

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