Literature DB >> 8754843

Effects of nonsense mutations on nuclear and cytoplasmic adenine phosphoribosyltransferase RNA.

O Kessler1, L A Chasin.   

Abstract

We have analyzed Chinese hamster ovary (CHO) cell mutants bearing nonsense codons in four of the five exons of the adenine phosphoribosyltransferase (aprt) gene and have found a pattern of mRNA reduction similar to that seen in systems studied previously: a decrease in steady-state mRNA levels of 5- to 10-fold for mutations in exons 1, 2, and 4 but little effect for mutations in the 3'-most exon (exon 5). Nuclear aprt mRNA levels showed a similar decrease. Nonsense-containing aprt mRNA decayed at the same rate as wild-type mRNA in these cell lines after inhibition of transcription with actinomycin D. Nonsense-containing aprt mRNA is associated with polysomes, ruling out a model in which stable residual mRNA escapes degradation by avoiding translation initiation. A tetracycline-responsive form of the aprt gene was used to compare the stability of nonsense-containing and wild-type aprt mRNAs without globally inhibiting transcription. In contrast to measurements made in the presence of actinomycin D, after inhibition of aprt transcription with tetracycline, a nonsense-mediated destabilization of aprt mRNA was indeed demonstrable. The increased rate of decay of cytoplasmic aprt mRNA seen here could account for the nonsense-mediated reduction in steady-state levels of aprt mRNA. However, the low levels of nonsense-bearing aprt mRNA in the nucleus suggest a sensibility of mRNA to translation or translatability before it exits that compartment. Quantitation of the steady-state levels of transcripts containing introns revealed no accumulation of partially spliced aprt RNA and hence no indication of nonsense-mediated aberrancies in splicing. Our results are consistent with a model in which translation facilitates the export of mRNA through a nuclear pore. However, the mechanism of this intriguing nucleocytoplasmic communication remains to be determined.

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Year:  1996        PMID: 8754843      PMCID: PMC231441          DOI: 10.1128/MCB.16.8.4426

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  62 in total

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3.  mRNA destabilization triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor.

Authors:  S W Peltz; A H Brown; A Jacobson
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4.  Control of BEK and K-SAM splice sites in alternative splicing of the fibroblast growth factor receptor 2 pre-mRNA.

Authors:  E Gilbert; F Del Gatto; P Champion-Arnaud; M C Gesnel; R Breathnach
Journal:  Mol Cell Biol       Date:  1993-09       Impact factor: 4.272

5.  The skipping of constitutive exons in vivo induced by nonsense mutations.

Authors:  H C Dietz; D Valle; C A Francomano; R J Kendzior; R E Pyeritz; G R Cutting
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6.  Stabilization and ribosome association of unspliced pre-mRNAs in a yeast upf1- mutant.

Authors:  F He; S W Peltz; J L Donahue; M Rosbash; A Jacobson
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-01       Impact factor: 11.205

7.  Direct selection for mutations affecting specific splice sites in a hamster dihydrofolate reductase minigene.

Authors:  I T Chen; L A Chasin
Journal:  Mol Cell Biol       Date:  1993-01       Impact factor: 4.272

8.  Nonsense codons can reduce the abundance of nuclear mRNA without affecting the abundance of pre-mRNA or the half-life of cytoplasmic mRNA.

Authors:  J Cheng; L E Maquat
Journal:  Mol Cell Biol       Date:  1993-03       Impact factor: 4.272

9.  Evidence for degradation of mRNA encoding alpha-L-iduronidase in Hurler fibroblasts with premature termination alleles.

Authors:  K P Menon; E F Neufeld
Journal:  Cell Mol Biol (Noisy-le-grand)       Date:  1994-11       Impact factor: 1.770

10.  Evidence to implicate translation by ribosomes in the mechanism by which nonsense codons reduce the nuclear level of human triosephosphate isomerase mRNA.

Authors:  P Belgrader; J Cheng; L E Maquat
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-15       Impact factor: 11.205

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  27 in total

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2.  Multiple splicing defects in an intronic false exon.

Authors:  H Sun; L A Chasin
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3.  Analysis of inhibitory action of modified U1 snRNAs on target gene expression: discrimination of two RNA targets differing by a 1 bp mismatch.

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4.  The effect of nonsense codons on splicing: a genomic analysis.

Authors:  Xiang Zhang; James Lee; Lawrence A Chasin
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

5.  Intranuclear degradation of nonsense codon-containing mRNA.

Authors:  Marc Bühler; Miles F Wilkinson; Oliver Mühlemann
Journal:  EMBO Rep       Date:  2002-07       Impact factor: 8.807

6.  Nonsense-mediated decay does not occur within the yeast nucleus.

Authors:  Nicolas Kuperwasser; Saverio Brogna; Ken Dower; Michael Rosbash
Journal:  RNA       Date:  2004-12       Impact factor: 4.942

7.  Nonsense codons trigger an RNA partitioning shift.

Authors:  Angela D Bhalla; Jayanthi P Gudikote; Jun Wang; Wai-Kin Chan; Yao-Fu Chang; O Renee Olivas; Miles F Wilkinson
Journal:  J Biol Chem       Date:  2008-12-17       Impact factor: 5.157

8.  X-Linked chronic granulomatous disease: mutations in the CYBB gene encoding the gp91-phox component of respiratory-burst oxidase.

Authors:  J Rae; P E Newburger; M C Dinauer; D Noack; P J Hopkins; R Kuruto; J T Curnutte
Journal:  Am J Hum Genet       Date:  1998-06       Impact factor: 11.025

9.  Binary specification of nonsense codons by splicing and cytoplasmic translation.

Authors:  R Thermann; G Neu-Yilik; A Deters; U Frede; K Wehr; C Hagemeier; M W Hentze; A E Kulozik
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

10.  The tripartite leader sequence of subgroup C adenovirus major late mRNAs can increase the efficiency of mRNA export.

Authors:  W Huang; S J Flint
Journal:  J Virol       Date:  1998-01       Impact factor: 5.103

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