Literature DB >> 8702297

Analysis of partial sequences of genes coding for 16S rRNA of actinomycetes isolated from Casuarina equisetifolia nodules in Mexico.

B M Niner1, J P Brandt, M Villegas, C R Marshall, A M Hirsch, M Valdés.   

Abstract

Filamentous bacteria isolated from surface-sterilized nodules of Casuarina equisetifolia trees in México were capable of reducing acetylene, a diagnostic test for nitrogenase, but were unable to nodulate their host. Analysis of partial 16S rRNA gene sequences suggests that the Mexican isolates are not Frankia strains but members of a novel clade.

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Year:  1996        PMID： 8702297      PMCID： PMC168091          DOI： 10.1128/aem.62.8.3034-3036.1996

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  8 in total

1.  Phylogenetic relationships among Frankia genomic species determined by use of amplified 16S rDNA sequences.

Authors:  S Nazaret; B Cournoyer; P Normand; P Simonet
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

2.  CLUSTAL V: improved software for multiple sequence alignment.

Authors:  D G Higgins; A J Bleasby; R Fuchs
Journal:  Comput Appl Biosci       Date:  1992-04

3.  Method for growing plants aeroponically.

Authors:  R W Zobel; P Del Tredici; J G Torrey
Journal:  Plant Physiol       Date:  1976-03       Impact factor: 8.340

4.  Extraction of ribosomal RNA from soil for detection of Frankia with oligonucleotide probes.

Authors:  D Hahn; R Kester; M J Starrenburg; A D Akkermans
Journal:  Arch Microbiol       Date:  1990       Impact factor: 2.552

5.  Reverse transcriptase sequencing of 16S ribosomal RNA from Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta, three wall type IV actinomycetes which lack mycolic acids.

Authors:  T M Embley; J Smida; E Stackebrandt
Journal:  J Gen Microbiol       Date:  1988-04

6.  Molecular phylogeny of the genus Frankia and related genera and emendation of the family Frankiaceae.

Authors:  P Normand; S Orso; B Cournoyer; P Jeannin; C Chapelon; J Dawson; L Evtushenko; A K Misra
Journal:  Int J Syst Bacteriol       Date:  1996-01

7.  Analysis of a ribosomal RNA operon in the actinomycete Frankia.

Authors:  P Normand; B Cournoyer; P Simonet; S Nazaret
Journal:  Gene       Date:  1992-02-01       Impact factor: 3.688

8.  Organization and nucleotide sequence analysis of a ribosomal RNA gene cluster from Streptomyces ambofaciens.

Authors:  J L Pernodet; F Boccard; M T Alegre; J Gagnat; M Guérineau
Journal:  Gene       Date:  1989-06-30       Impact factor: 3.688
  8 in total
  6 in total

1.  Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients.

Authors:  H Heuer; M Krsek; P Baker; K Smalla; E M Wellington
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

2.  Non-Frankia actinomycetes isolated from surface-sterilized roots of Casuarina equisetifolia fix nitrogen.

Authors:  María Valdés; Néstor-Octavio Pérez; Paulina Estrada-de Los Santos; Jesús Caballero-Mellado; Juan José Peña-Cabriales; Philippe Normand; Ann M Hirsch
Journal:  Appl Environ Microbiol       Date:  2005-01       Impact factor: 4.792

3.  Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules.

Authors:  Ann M Hirsch; Johana Alvarado; David Bruce; Olga Chertkov; Peter L De Hoff; John C Detter; Nancy A Fujishige; Lynne A Goodwin; James Han; Shunsheng Han; Natalia Ivanova; Miriam L Land; Michelle R Lum; Nima Milani-Nejad; Matt Nolan; Amrita Pati; Sam Pitluck; Stephen S Tran; Tanja Woyke; Maria Valdés
Journal:  Genome Announc       Date:  2013-09-26

4.  Permanent Draft Genome Sequence of Nocardia sp. BMG111209, an Actinobacterium Isolated from Nodules of Casuarina glauca.

Authors:  Faten Ghodhbane-Gtari; Nicholas Beauchemin; Abdellatif Gueddou; Karima Hezbri; Amir Ktari; Moussa Louati; Imen Nouioui; Amy Chen; Marcel Huntemann; Natalia Ivanova; Nikos Kyrpides; Victor Markowitz; Kostas Mavrommatis; Ioanna Pagani; Arnab Sen; Luis Wall; Tanja Woyke; Maher Gtari; Louis S Tisa
Journal:  Genome Announc       Date:  2016-08-04

5.  Alone Yet Not Alone: Frankia Lives Under the Same Roof With Other Bacteria in Actinorhizal Nodules.

Authors:  Faten Ghodhbane-Gtari; Timothy D'Angelo; Abdellatif Gueddou; Sabrine Ghazouani; Maher Gtari; Louis S Tisa
Journal:  Front Microbiol       Date:  2021-12-02       Impact factor: 5.640

6.  Monitoring the colonization and infection of legume nodules by Micromonospora in co-inoculation experiments with rhizobia.

Authors:  Patricia Benito; Pablo Alonso-Vega; Carolina Aguado; Rafael Luján; Yojiro Anzai; Ann M Hirsch; Martha E Trujillo
Journal:  Sci Rep       Date:  2017-09-08       Impact factor: 4.379
  6 in total

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