Literature DB >> 2460582

Reverse transcriptase sequencing of 16S ribosomal RNA from Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta, three wall type IV actinomycetes which lack mycolic acids.

T M Embley1, J Smida, E Stackebrandt.   

Abstract

The phylogenetic relationships of three mycolateless wall type IV actinomycetes, Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta, were examined using reverse transcriptase sequencing of 16S ribosomal RNA. The sequences generated were aligned and the level of sequence homology calculated. The homology values were then use to produce a phylogenetic tree and to estimate S(AB) values for the construction of a dendrogram. Both analyses show the three taxa to be closely related genera which form a distinct subdivision within the broader phylogenetic grouping defined by Mycobacterium, Dactylosporangium and their relatives.

Entities:  

Mesh:

Substances:

Year:  1988        PMID: 2460582     DOI: 10.1099/00221287-134-4-961

Source DB:  PubMed          Journal:  J Gen Microbiol        ISSN: 0022-1287


  22 in total

1.  Identification of lactococci and enterococci by colony hybridization with 23S rRNA-targeted oligonucleotide probes.

Authors:  D Betzl; W Ludwig; K H Schleifer
Journal:  Appl Environ Microbiol       Date:  1990-09       Impact factor: 4.792

Review 2.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; P De Rijk; A Goris; R De Wachter
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

3.  Nucleotide sequence of 16S ribosomal RNA from Lactobacillus kandleri and Lactobacillus minor.

Authors:  A J Martinez-Murcia; M D Collins
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

4.  Nucleotide sequence of 16S ribosomal RNA from Lactobacillus viridescens and Lactobacillus confusus.

Authors:  A J Martinez-Murcia; M D Collins
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

5.  16S rRNA sequences of uncultivated hot spring cyanobacterial mat inhabitants retrieved as randomly primed cDNA.

Authors:  R Weller; J W Weller; D M Ward
Journal:  Appl Environ Microbiol       Date:  1991-04       Impact factor: 4.792

6.  Isolation and characterization of a copper-resistant methanogen from a copper-mining soil sample.

Authors:  B K Kim; E Conway de Macario; J Nölling; L Daniels
Journal:  Appl Environ Microbiol       Date:  1996-07       Impact factor: 4.792

7.  Oligonucleotide Probes That Hybridize with rRNA as a Tool To Study Frankia Strains in Root Nodules.

Authors:  D Hahn; M J Starrenburg; A D Akkermans
Journal:  Appl Environ Microbiol       Date:  1990-05       Impact factor: 4.792

8.  Extraction of ribosomal RNA from soil for detection of Frankia with oligonucleotide probes.

Authors:  D Hahn; R Kester; M J Starrenburg; A D Akkermans
Journal:  Arch Microbiol       Date:  1990       Impact factor: 2.552

9.  Development of PCR-based hybridization protocol for identification of streptococcal species.

Authors:  R W Bentley; J A Leigh
Journal:  J Clin Microbiol       Date:  1995-05       Impact factor: 5.948

10.  Frankia genus-specific characterization by polymerase chain reaction.

Authors:  P Simonet; M C Grosjean; A K Misra; S Nazaret; B Cournoyer; P Normand
Journal:  Appl Environ Microbiol       Date:  1991-11       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.