Literature DB >> 8692822

Dynamic methylation adjustment and counting as part of imprinting mechanisms.

R Shemer1, Y Birger, W L Dean, W Reik, A D Riggs, A Razin.   

Abstract

Monoallelic expression in diploid mammalian cells appears to be a widespread phenomenon, with the most studied examples being X-chromosome inactivation in eutherian female cells and genomic imprinting in the mouse and human. Silencing and methylation of certain sites on one of the two alleles in somatic cells is specific with respect to parental source for imprinted genes and random for X-linked genes. We report here evidence indicating that: (i) differential methylation patterns of imprinted genes are not simply copied from the gametes, but rather established gradually after fertilization; (ii) very similar methylation patterns are observed for diploid, tetraploid, parthenogenic, and androgenic preimplantation mouse embryos, as well as parthenogenic and androgenic mouse embryonic stem cells; (iii) haploid parthenogenic embryos do not show methylation adjustment as seen in diploid or tetraploid embryos, but rather retain the maternal pattern. These observations suggest that differential methylation in imprinted genes is achieved by a dynamic process that senses gene dosage and adjusts methylation similar to X-chromosome inactivation.

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Year:  1996        PMID: 8692822      PMCID: PMC39029          DOI: 10.1073/pnas.93.13.6371

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

Review 1.  X-chromosome inactivation and cell memory.

Authors:  A D Riggs; G P Pfeifer
Journal:  Trends Genet       Date:  1992-05       Impact factor: 11.639

2.  A new imprinted gene cloned by a methylation-sensitive genome scanning method.

Authors:  I Hatada; T Sugama; T Mukai
Journal:  Nucleic Acids Res       Date:  1993-12-11       Impact factor: 16.971

3.  Genomic imprinting. Silence of the genes.

Authors:  M A Surani
Journal:  Nature       Date:  1993-11-25       Impact factor: 49.962

4.  Allele-specific replication timing of imprinted gene regions.

Authors:  D Kitsberg; S Selig; M Brandeis; I Simon; I Keshet; D J Driscoll; R D Nicholls; H Cedar
Journal:  Nature       Date:  1993-07-29       Impact factor: 49.962

5.  Culture of preimplantation embryos.

Authors:  J A Lawitts; J D Biggers
Journal:  Methods Enzymol       Date:  1993       Impact factor: 1.600

6.  Oppositely imprinted genes H19 and insulin-like growth factor 2 are coexpressed in human androgenetic trophoblast.

Authors:  G L Mutter; C L Stewart; M L Chaponot; R J Pomponio
Journal:  Am J Hum Genet       Date:  1993-11       Impact factor: 11.025

7.  Epigenetic mechanisms underlying the imprinting of the mouse H19 gene.

Authors:  M S Bartolomei; A L Webber; M E Brunkow; S M Tilghman
Journal:  Genes Dev       Date:  1993-09       Impact factor: 11.361

8.  Maternal-specific methylation of the imprinted mouse Igf2r locus identifies the expressed locus as carrying the imprinting signal.

Authors:  R Stöger; P Kubicka; C G Liu; T Kafri; A Razin; H Cedar; D P Barlow
Journal:  Cell       Date:  1993-04-09       Impact factor: 41.582

9.  Role for DNA methylation in genomic imprinting.

Authors:  E Li; C Beard; R Jaenisch
Journal:  Nature       Date:  1993-11-25       Impact factor: 49.962

10.  The ontogeny of allele-specific methylation associated with imprinted genes in the mouse.

Authors:  M Brandeis; T Kafri; M Ariel; J R Chaillet; J McCarrey; A Razin; H Cedar
Journal:  EMBO J       Date:  1993-09       Impact factor: 11.598

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  19 in total

1.  Genetic conflicts in genomic imprinting.

Authors:  A Burt; R Trivers
Journal:  Proc Biol Sci       Date:  1998-12-22       Impact factor: 5.349

2.  Domain regulation of imprinting cluster in Kip2/Lit1 subdomain on mouse chromosome 7F4/F5: large-scale DNA methylation analysis reveals that DMR-Lit1 is a putative imprinting control region.

Authors:  Hitomi Yatsuki; Keiichiro Joh; Ken Higashimoto; Hidenobu Soejima; Yuji Arai; Youdong Wang; Izuho Hatada; Yayoi Obata; Hiroko Morisaki; Zhongming Zhang; Tetsuji Nakagawachi; Yuji Satoh; Tsunehiro Mukai
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

3.  High concentrations of long interspersed nuclear element sequence distinguish monoallelically expressed genes.

Authors:  Elena Allen; Steve Horvath; Frances Tong; Peter Kraft; Elizabeth Spiteri; Arthur D Riggs; York Marahrens
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-08       Impact factor: 11.205

4.  A 5' 2-kilobase-pair region of the imprinted mouse H19 gene exhibits exclusive paternal methylation throughout development.

Authors:  K D Tremblay; K L Duran; M S Bartolomei
Journal:  Mol Cell Biol       Date:  1997-08       Impact factor: 4.272

5.  Clonal heterogeneity at allelic methylation sites diagnostic for Prader-Willi and Angelman syndromes.

Authors:  J M LaSalle; R J Ritchie; H Glatt; M Lalande
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

6.  The imprinting mechanism of the Prader-Willi/Angelman regional control center.

Authors:  Jonathan Perk; Kirill Makedonski; Laura Lande; Howard Cedar; Aharon Razin; Ruth Shemer
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

7.  Gatm, a creatine synthesis enzyme, is imprinted in mouse placenta.

Authors:  Lisa L Sandell; Xiao-Juan Guan; Robert Ingram; Shirley M Tilghman
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-01       Impact factor: 11.205

8.  Loss of the maternal H19 gene induces changes in Igf2 methylation in both cis and trans.

Authors:  T Forné; J Oswald; W Dean; J R Saam; B Bailleul; L Dandolo; S M Tilghman; J Walter; W Reik
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

9.  Structure of the imprinted mouse Snrpn gene and establishment of its parental-specific methylation pattern.

Authors:  R Shemer; Y Birger; A D Riggs; A Razin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

10.  The relationship of DNA methylation with age, gender and genotype in twins and healthy controls.

Authors:  Marco P Boks; Eske M Derks; Daniel J Weisenberger; Erik Strengman; Esther Janson; Iris E Sommer; René S Kahn; Roel A Ophoff
Journal:  PLoS One       Date:  2009-08-26       Impact factor: 3.240

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