Literature DB >> 12411498

The imprinting mechanism of the Prader-Willi/Angelman regional control center.

Jonathan Perk1, Kirill Makedonski, Laura Lande, Howard Cedar, Aharon Razin, Ruth Shemer.   

Abstract

The 2 Mb domain on chromosome 15q11-q13 that carries the imprinted genes involved in Prader-Willi (PWS) and Angelman (AS) syndromes is under the control of an imprinting center comprising two regulatory regions, the PWS-SRO located around the SNRPN promoter and the AS-SRO located 35 kb upstream. Here we describe the results of an analysis of the epigenetic features of these two sequences and their interaction. The AS-SRO is sensitive to DNase I, and packaged with acetylated histone H4 and methylated histone H3(K4) only on the maternal allele, and this imprinted epigenetic structure is maintained in dividing cells despite the absence of clearcut differential DNA methylation. Genetic analysis shows that the maternal AS-SRO is essential for setting up the DNA methylation state and closed chromatin structure of the neighboring PWS-SRO. In contrast, the PWS-SRO has no influence on the epigenetic features of the AS-SRO. These results suggest a stepwise, unidirectional program in which structural imprinting at the AS-SRO brings about allele-specific repression of the maternal PWS-SRO, thereby preventing regional activation of genes on this allele.

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Year:  2002        PMID: 12411498      PMCID: PMC131067          DOI: 10.1093/emboj/cdf570

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  35 in total

Review 1.  Genomic imprinting in mammals: an interplay between chromatin and DNA methylation?

Authors:  R Feil; S Khosla
Journal:  Trends Genet       Date:  1999-11       Impact factor: 11.639

2.  A novel maternally expressed gene, ATP10C, encodes a putative aminophospholipid translocase associated with Angelman syndrome.

Authors:  M Meguro; A Kashiwagi; K Mitsuya; M Nakao; I Kondo; S Saitoh; M Oshimura
Journal:  Nat Genet       Date:  2001-05       Impact factor: 38.330

3.  A 5-kb imprinting center deletion in a family with Angelman syndrome reduces the shortest region of deletion overlap to 880 bp.

Authors:  K Buiting; C Lich; S Cottrell; A Barnicoat; B Horsthemke
Journal:  Hum Genet       Date:  1999-12       Impact factor: 4.132

4.  Association of acetylated histones with paternally expressed genes in the Prader--Willi deletion region.

Authors:  S B Fulmer-Smentek; U Francke
Journal:  Hum Mol Genet       Date:  2001-03-15       Impact factor: 6.150

5.  Parent-of-origin specific histone acetylation and reactivation of a key imprinted gene locus in Prader-Willi syndrome.

Authors:  S Saitoh; T Wada
Journal:  Am J Hum Genet       Date:  2000-04-20       Impact factor: 11.025

6.  Maternal methylation imprints on human chromosome 15 are established during or after fertilization.

Authors:  O El-Maarri; K Buiting; E G Peery; P M Kroisel; B Balaban; K Wagner; B Urman; J Heyd; C Lich; C I Brannan; J Walter; B Horsthemke
Journal:  Nat Genet       Date:  2001-03       Impact factor: 38.330

7.  De novo deletions of SNRPN exon 1 in early human and mouse embryos result in a paternal to maternal imprint switch.

Authors:  B Bielinska; S M Blaydes; K Buiting; T Yang; M Krajewska-Walasek; B Horsthemke; C I Brannan
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

8.  Parental origin-specific expression of Mash2 is established at the time of implantation with its imprinting mechanism highly resistant to genome-wide demethylation.

Authors:  M Tanaka; M Puchyr; M Gertsenstein; K Harpal; R Jaenisch; J Rossant; A Nagy
Journal:  Mech Dev       Date:  1999-09       Impact factor: 1.882

9.  DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci.

Authors:  M R Rountree; K E Bachman; S B Baylin
Journal:  Nat Genet       Date:  2000-07       Impact factor: 38.330

10.  Disruption of the bipartite imprinting center in a family with Angelman syndrome.

Authors:  K Buiting; A Barnicoat; C Lich; M Pembrey; S Malcolm; B Horsthemke
Journal:  Am J Hum Genet       Date:  2001-03-23       Impact factor: 11.025

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  25 in total

1.  Overlapping euchromatin/heterochromatin- associated marks are enriched in imprinted gene regions and predict allele-specific modification.

Authors:  Bo Wen; Hao Wu; Hans Bjornsson; Roland D Green; Rafael Irizarry; Andrew P Feinberg
Journal:  Genome Res       Date:  2008-10-10       Impact factor: 9.043

2.  Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements.

Authors:  Florian M Pauler; Stefan H Stricker; Katarzyna E Warczok; Denise P Barlow
Journal:  Genome Res       Date:  2005-10       Impact factor: 9.043

3.  Deficiency of Rbbp1/Arid4a and Rbbp1l1/Arid4b alters epigenetic modifications and suppresses an imprinting defect in the PWS/AS domain.

Authors:  Mei-Yi Wu; Ting-Fen Tsai; Arthur L Beaudet
Journal:  Genes Dev       Date:  2006-10-15       Impact factor: 11.361

Review 4.  Maintenance of Epigenetic Information.

Authors:  Geneviève Almouzni; Howard Cedar
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-05-02       Impact factor: 10.005

Review 5.  Role of DNA methylation in imprinting disorders: an updated review.

Authors:  Amr Rafat Elhamamsy
Journal:  J Assist Reprod Genet       Date:  2017-03-09       Impact factor: 3.412

6.  Genomic imprinting of experience-dependent cortical plasticity by the ubiquitin ligase gene Ube3a.

Authors:  Masaaki Sato; Michael P Stryker
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-08       Impact factor: 11.205

7.  Narrowed abrogation of the Angelman syndrome critical interval on human chromosome 15 does not interfere with epigenotype maintenance in somatic cells.

Authors:  Masayuki Haruta; Makiko Meguro; Yu-Ki Sakamoto; Hidetoshi Hoshiya; Akiko Kashiwagi; Yasuhiko Kaneko; Kohzoh Mitsuya; Mitsuo Oshimura
Journal:  J Hum Genet       Date:  2005-03-03       Impact factor: 3.172

8.  Distinguishing epigenetic marks of developmental and imprinting regulation.

Authors:  Kirsten R McEwen; Anne C Ferguson-Smith
Journal:  Epigenetics Chromatin       Date:  2010-01-15       Impact factor: 4.954

9.  Autosomal dominant pseudohypoparathyroidism type Ib is associated with a heterozygous microdeletion that likely disrupts a putative imprinting control element of GNAS.

Authors:  Murat Bastepe; Leopold F Fröhlich; Geoffrey N Hendy; Olafur S Indridason; Robert G Josse; Hiroyuki Koshiyama; Jarmo Körkkö; Jon M Nakamoto; Arlan L Rosenbloom; Arnold H Slyper; Toshitsugu Sugimoto; Agathocles Tsatsoulis; John D Crawford; Harald Jüppner
Journal:  J Clin Invest       Date:  2003-10       Impact factor: 14.808

10.  Epigenetic properties and identification of an imprint mark in the Nesp-Gnasxl domain of the mouse Gnas imprinted locus.

Authors:  Candice Coombes; Philippe Arnaud; Emma Gordon; Wendy Dean; Elizabeth A Coar; Christine M Williamson; Robert Feil; Jo Peters; Gavin Kelsey
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

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