Literature DB >> 8679623

Escherichia coli diacylglycerol kinase is an alpha-helical polytopic membrane protein and can spontaneously insert into preformed lipid vesicles.

C R Sanders1, L Czerski, O Vinogradova, P Badola, D Song, S O Smith.   

Abstract

Escherichia coli diacylglycerol kinase (DAGK) is a 13.2 kDa enzyme which spans the cytoplasmic membrane three times. Functional DAGK was purified to homogeneity using a polyhistidine tag and Ni(II)-chelate chromatography. Transmission Fourier transform infrared spectroscopy (FT-IR) of DAGK in phosphatidylcholine multilayers led to the conclusion that > or = 90 of DAGK's native 121 residues are alpha-helical, consistent with a model in which DAGK consists of two amphipathic alpha-helices and three transmembrane helices. Polarized attenuated total reflection FT-IR studies of DAGK in oriented multilamellae yielded data consistent with a topological arrangement in which the three transmembrane helices are well-aligned with the bilayer normal while the two amphipathic helices are approximately parallel with the membrane plane. The ability of DAGK to spontaneously insert into preformed lipid vesicles was examined using a novel assay system involving DAGK-catalyzed phosphorylation of a fluorescently tagged diacylglycerol. When micellar DAGK is diluted into L alpha-phase vesicles spontaneous insertion of the enzyme is fairly efficient (ca. 30%). DAGK refolding and insertion from delipidated urea-solubilized DAGK into lipid vesicles is also modestly efficient (3.8 +/- 2.1%) above the gel to liquid crystalline phase transition temperature. The insertion studies indicate that the difference in energy barriers (delta delta G++) between pathways leading to catalytically productive folding and insertion of DAGK relative to unproductive pathways is < 4 kcal/mol. However, additional studies carried out with mutant forms of DAGK indicated that the differences between refolding/insertion pathways for DAGK in vivo and in vitro can be significant.

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Year:  1996        PMID: 8679623     DOI: 10.1021/bi9604892

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  Towards the total chemical synthesis of integral membrane proteins: a general method for the synthesis of hydrophobic peptide-thioester building blocks.

Authors:  Erik C B Johnson; Stephen B H Kent
Journal:  Tetrahedron Lett       Date:  2007-03-05       Impact factor: 2.415

2.  Membrane protein structural validation by oriented sample solid-state NMR: diacylglycerol kinase.

Authors:  Dylan T Murray; Conggang Li; F Philip Gao; Huajun Qin; Timothy A Cross
Journal:  Biophys J       Date:  2014-04-15       Impact factor: 4.033

3.  Fatty acids inhibit growth-factor-induced diacylglycerol kinase alpha activation in vascular smooth-muscle cells.

Authors:  X Du; Y Jiang; W Qian; X Lu; J P Walsh
Journal:  Biochem J       Date:  2001-07-01       Impact factor: 3.857

4.  Probing Arabidopsis chloroplast diacylglycerol pools by selectively targeting bacterial diacylglycerol kinase to suborganellar membranes.

Authors:  Bagyalakshmi Muthan; Rebecca L Roston; John E Froehlich; Christoph Benning
Journal:  Plant Physiol       Date:  2013-07-09       Impact factor: 8.340

5.  Escherichia coli diacylglycerol kinase: a case study in the application of solution NMR methods to an integral membrane protein.

Authors:  O Vinogradova; P Badola; L Czerski; F D Sönnichsen; C R Sanders
Journal:  Biophys J       Date:  1997-06       Impact factor: 4.033

6.  Interfacial enzyme kinetics of a membrane bound kinase analyzed by real-time MAS-NMR.

Authors:  Sandra J Ullrich; Ute A Hellmich; Stefan Ullrich; Clemens Glaubitz
Journal:  Nat Chem Biol       Date:  2011-03-20       Impact factor: 15.040

7.  Lipid cubic phase as a membrane mimetic for integral membrane protein enzymes.

Authors:  Dianfan Li; Martin Caffrey
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-09       Impact factor: 11.205

8.  On choosing a detergent for solution NMR studies of membrane proteins.

Authors:  O Vinogradova; F Sönnichsen; C R Sanders
Journal:  J Biomol NMR       Date:  1998-05       Impact factor: 2.835

9.  Cell-free expression and in meso crystallisation of an integral membrane kinase for structure determination.

Authors:  Coilín Boland; Dianfan Li; Syed Tasadaque Ali Shah; Stefan Haberstock; Volker Dötsch; Frank Bernhard; Martin Caffrey
Journal:  Cell Mol Life Sci       Date:  2014-07-11       Impact factor: 9.261

10.  Crystal structure of the integral membrane diacylglycerol kinase.

Authors:  Dianfan Li; Joseph A Lyons; Valerie E Pye; Lutz Vogeley; David Aragão; Colin P Kenyon; Syed T A Shah; Christine Doherty; Margaret Aherne; Martin Caffrey
Journal:  Nature       Date:  2013-05-15       Impact factor: 49.962

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