Literature DB >> 8650185

Conformational trapping in a membrane environment: a regulatory mechanism for protein activity?

S Arumugam1, S Pascal, C L North, W Hu, K C Lee, M Cotten, R R Ketchem, F Xu, M Brenneman, F Kovacs, F Tian, A Wang, S Huo, T A Cross.   

Abstract

Functional regulation of proteins is central to living organisms. Here it is shown that a nonfunctional conformational state of a polypeptide can be kinetically trapped in a lipid bilayer environment. This state is a metastable structure that is stable for weeks just above the phase transition temperature of the lipid. When the samples are incubated for several days at 68 degrees C, 50% of the trapped conformation converts to the minimum-energy functional state. This result suggests the possibility that another mechanism for functional regulation of protein activity may be available for membrane proteins: that cells may insert proteins into membranes in inactive states pending the biological demand for protein function.

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Year:  1996        PMID: 8650185      PMCID: PMC39154          DOI: 10.1073/pnas.93.12.5872

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Structure of an isolated gramicidin A double helical species by high-resolution nuclear magnetic resonance.

Authors:  S M Pascal; T A Cross
Journal:  J Mol Biol       Date:  1992-08-20       Impact factor: 5.469

2.  A conformational rearrangement in gramicidin A: from a double-stranded left-handed to a single-stranded right-handed helix.

Authors:  Z Zhang; S M Pascal; T A Cross
Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

3.  NMR studies of the structure and dynamics of membrane-bound bacteriophage Pf1 coat protein.

Authors:  K J Shon; Y Kim; L A Colnago; S J Opella
Journal:  Science       Date:  1991-05-31       Impact factor: 47.728

4.  High-resolution structure and dynamic implications for a double-helical gramicidin A conformer.

Authors:  S M Pascal; T A Cross
Journal:  J Biomol NMR       Date:  1993-09       Impact factor: 2.835

5.  High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR.

Authors:  R R Ketchem; W Hu; T A Cross
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

6.  Three-dimensional structure at 0.86 A of the uncomplexed form of the transmembrane ion channel peptide gramicidin A.

Authors:  D A Langs
Journal:  Science       Date:  1988-07-08       Impact factor: 47.728

7.  The conformation of gramicidin A.

Authors:  W R Veatch; E T Fossel; E R Blout
Journal:  Biochemistry       Date:  1974-12-17       Impact factor: 3.162

8.  The effect of water on enzyme action in organic media.

Authors:  A Zaks; A M Klibanov
Journal:  J Biol Chem       Date:  1988-06-15       Impact factor: 5.157

9.  Kinetics of gramicidin channel formation in lipid bilayers: transmembrane monomer association.

Authors:  A M O'Connell; R E Koeppe; O S Andersen
Journal:  Science       Date:  1990-11-30       Impact factor: 47.728

10.  Enzymatic catalysis and dynamics in low-water environments.

Authors:  R Affleck; Z F Xu; V Suzawa; K Focht; D S Clark; J S Dordick
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-01       Impact factor: 11.205

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  21 in total

1.  Validation of the single-stranded channel conformation of gramicidin A by solid-state NMR.

Authors:  F Kovacs; J Quine; T A Cross
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

2.  Structure of the transmembrane region of the M2 protein H(+) channel.

Authors:  J Wang; S Kim; F Kovacs; T A Cross
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

3.  Computer simulations of membrane protein folding: structure and dynamics.

Authors:  C-M Chen; C-C Chen
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

4.  Uniformity, ideality, and hydrogen bonds in transmembrane alpha-helices.

Authors:  Sanguk Kim; Timothy A Cross
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

Review 5.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

6.  Dynamics of a membrane-bound tryptophan analog in environments of varying hydration: a fluorescence approach.

Authors:  Amitabha Chattopadhyay; Ajuna Arora; Devaki A Kelkar
Journal:  Eur Biophys J       Date:  2005-09-24       Impact factor: 1.733

7.  Modeling the membrane environment for membrane proteins.

Authors:  Frances Separovic; J Antoinette Killian; Myriam Cotten; David D Busath; Timothy A Cross
Journal:  Biophys J       Date:  2011-04-20       Impact factor: 4.033

8.  Protein stability and conformational rearrangements in lipid bilayers: linear gramicidin, a model system.

Authors:  M Cotten; F Xu; T A Cross
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

9.  Solid state NMR: The essential technology for helical membrane protein structural characterization.

Authors:  Timothy A Cross; Vindana Ekanayake; Joana Paulino; Anna Wright
Journal:  J Magn Reson       Date:  2013-12-19       Impact factor: 2.229

10.  Structural restraints and heterogeneous orientation of the gramicidin A channel closed state in lipid bilayers.

Authors:  Y Mo; T A Cross; W Nerdal
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

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