Literature DB >> 8641269

Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X.

F Galibert1, D Alexandraki, A Baur, E Boles, N Chalwatzis, J C Chuat, F Coster, C Cziepluch, M De Haan, H Domdey, P Durand, K D Entian, M Gatius, A Goffeau, L A Grivell, A Hennemann, C J Herbert, K Heumann, F Hilger, C P Hollenberg, M E Huang, C Jacq, J C Jauniaux, C Katsoulou, L Karpfinger-Hartl.   

Abstract

The complete nucleotide sequence of Saccharomyces cerevisiae chromosome X (745 442 bp) reveals a total of 379 open reading frames (ORFs), the coding region covering approximately 75% of the entire sequence. One hundred and eighteen ORFs (31%) correspond to genes previously identified in S. cerevisiae. All other ORFs represent novel putative yeast genes, whose function will have to be determined experimentally. However, 57 of the latter subset (another 15% of the total) encode proteins that show significant analogy to proteins of known function from yeast or other organisms. The remaining ORFs, exhibiting no significant similarity to any known sequence, amount to 54% of the total. General features of chromosome X are also reported, with emphasis on the nucleotide frequency distribution in the environment of the ATG and stop codons, the possible coding capacity of at least some of the small ORFs (<100 codons) and the significance of 46 non-canonical or unpaired nucleotides in the stems of some of the 24 tRNA genes recognized on this chromosome.

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Year:  1996        PMID: 8641269      PMCID: PMC450125     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  41 in total

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5.  The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications.

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Journal:  Nucleic Acids Res       Date:  1987-02-11       Impact factor: 16.971

Review 6.  An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs.

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Journal:  Nucleic Acids Res       Date:  1987-10-26       Impact factor: 16.971

7.  Editing corrects mispairing in the acceptor stem of bean and potato mitochondrial phenylalanine transfer RNAs.

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8.  Site-specific DNA endonuclease and RNA maturase activities of two homologous intron-encoded proteins from yeast mitochondria.

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Journal:  Nature       Date:  1989-03-02       Impact factor: 49.962

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  19 in total

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Journal:  Mol Cell Biol       Date:  1997-09       Impact factor: 4.272

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Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

7.  Three copies of the ATP2 gene are arranged in tandem on chromosome X in the yeast Saccharomyces cerevisiae.

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8.  The nucleotide sequence of Saccharomyces cerevisiae chromosome XII.

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Journal:  Nature       Date:  1997-05-29       Impact factor: 49.962

9.  The STK2 gene, which encodes a putative Ser/Thr protein kinase, is required for high-affinity spermidine transport in Saccharomyces cerevisiae.

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