Literature DB >> 10581269

Analysis of the seven-member AAD gene set demonstrates that genetic redundancy in yeast may be more apparent than real.

D Delneri1, D C Gardner, S G Oliver.   

Abstract

Saccharomyces cerevisiae has seven genes encoding proteins with a high degree (>85%) of amino-acid sequence identity to the aryl-alcohol dehydrogenase of the lignin-degrading, filamentous fungus, Phanerochaete chrysosporium. All but one member of this gene set are telomere associated. Moreover, all contain a sequence similar to the DNA-binding site of the Yap1p transcriptional activator either upstream of or within their coding sequences. The expression of the AAD genes was found to be induced by chemicals, such as diamide and diethyl maleic acid ester (DEME), that cause an oxidative shock by inactivating the glutathione (GSH) reservoir of the cells. In contrast, the oxidizing agent hydrogen peroxide has no effect on the expression of these genes. We found that the response to anti-GSH agents was Yap1p dependent. The very high level of nucleotide sequence similarity between the AAD genes makes it difficult to determine if they are all involved in the oxidative-stress response. The use of single and multiple aad deletants demonstrated that only AAD4 (YDL243c) and AAD6 (YFL056/57c) respond to the oxidative stress. Of these two genes, only AAD4 is likely to be functional since the YFL056/57c open reading frame is interrupted by a stop codon. Thus, in terms of the function in response to oxidative stress, the sevenfold redundancy of the AAD gene set is more apparent than real.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10581269      PMCID: PMC1460870     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  39 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  Evolution of gene order and chromosome number in Saccharomyces, Kluyveromyces and related fungi.

Authors:  R S Keogh; C Seoighe; K H Wolfe
Journal:  Yeast       Date:  1998-03-30       Impact factor: 3.239

3.  Molecular evolution of the telomere-associated MAL loci of Saccharomyces.

Authors:  M J Charron; E Read; S R Haut; C A Michels
Journal:  Genetics       Date:  1989-06       Impact factor: 4.562

4.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

5.  Disruption of seven hypothetical aryl alcohol dehydrogenase genes from Saccharomyces cerevisiae and construction of a multiple knock-out strain.

Authors:  D Delneri; D C Gardner; C V Bruschi; S G Oliver
Journal:  Yeast       Date:  1999-11       Impact factor: 3.239

6.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

7.  Evolution of the dispersed SUC gene family of Saccharomyces by rearrangements of chromosome telomeres.

Authors:  M Carlson; J L Celenza; F J Eng
Journal:  Mol Cell Biol       Date:  1985-11       Impact factor: 4.272

8.  Yeast YAP1 encodes a novel form of the jun family of transcriptional activator proteins.

Authors:  W S Moye-Rowley; K D Harshman; C S Parker
Journal:  Genes Dev       Date:  1989-03       Impact factor: 11.361

Review 9.  Synthesis of ribosomes in Saccharomyces cerevisiae.

Authors:  J R Warner
Journal:  Microbiol Rev       Date:  1989-06

10.  A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.

Authors:  R S Sikorski; P Hieter
Journal:  Genetics       Date:  1989-05       Impact factor: 4.562

View more
  20 in total

1.  Identification of programmed translational -1 frameshifting sites in the genome of Saccharomyces cerevisiae.

Authors:  Michaël Bekaert; Hugues Richard; Bernard Prum; Jean-Pierre Rousset
Journal:  Genome Res       Date:  2005-10       Impact factor: 9.043

2.  Genome-wide expression analysis of yeast response during exposure to 4 degrees C.

Authors:  Yoshinori Murata; Takayuki Homma; Emiko Kitagawa; Yuko Momose; Masanori S Sato; Mine Odani; Hisayo Shimizu; Mika Hasegawa-Mizusawa; Rena Matsumoto; Satomi Mizukami; Katsuhide Fujita; Meher Parveen; Yasuhiko Komatsu; Hitoshi Iwahashi
Journal:  Extremophiles       Date:  2005-10-28       Impact factor: 2.395

3.  Microarray analysis of p-anisaldehyde-induced transcriptome of Saccharomyces cerevisiae.

Authors:  Lu Yu; Na Guo; Yi Yang; Xiuping Wu; Rizeng Meng; Junwen Fan; Fa Ge; Xuelin Wang; Jingbo Liu; Xuming Deng
Journal:  J Ind Microbiol Biotechnol       Date:  2009-12-19       Impact factor: 3.346

4.  Functional genomics: lessons from yeast.

Authors:  Stephen G Oliver
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-01-29       Impact factor: 6.237

5.  Oxidative stress tolerance, adenylate cyclase, and autophagy are key players in the chronological life span of Saccharomyces cerevisiae during winemaking.

Authors:  Helena Orozco; Emilia Matallana; Agustín Aranda
Journal:  Appl Environ Microbiol       Date:  2012-02-10       Impact factor: 4.792

6.  Leveraging Genetic-Background Effects in Saccharomyces cerevisiae To Improve Lignocellulosic Hydrolysate Tolerance.

Authors:  Maria Sardi; Nikolay Rovinskiy; Yaoping Zhang; Audrey P Gasch
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

7.  Exposure of Saccharomyces cerevisiae to acetaldehyde induces sulfur amino acid metabolism and polyamine transporter genes, which depend on Met4p and Haa1p transcription factors, respectively.

Authors:  Agustín Aranda; Marcel-lí del Olmo
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

8.  Complete genome sequence and analysis of a Saccharomyces cerevisiae strain used for sugarcane spirit production.

Authors:  Ane Catarine Tosi Costa; Jacob Hornick; Tathiana Ferreira Sá Antunes; Alexandre Martins Costa Santos; A Alberto R Fernandes; James R Broach; Patricia M B Fernandes
Journal:  Braz J Microbiol       Date:  2021-04-09       Impact factor: 2.476

9.  Whole-genome comparison reveals novel genetic elements that characterize the genome of industrial strains of Saccharomyces cerevisiae.

Authors:  Anthony R Borneman; Brian A Desany; David Riches; Jason P Affourtit; Angus H Forgan; Isak S Pretorius; Michael Egholm; Paul J Chambers
Journal:  PLoS Genet       Date:  2011-02-03       Impact factor: 5.917

10.  Plasticity of genetic interactions in metabolic networks of yeast.

Authors:  Richard Harrison; Balázs Papp; Csaba Pál; Stephen G Oliver; Daniela Delneri
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-06       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.