Literature DB >> 8639651

Local mobility within villin 14T probed via heteronuclear relaxation measurements and a reduced spectral density mapping.

M A Markus1, K T Dayie, P Matsudaira, G Wagner.   

Abstract

Villin 14T, a representative domain from the actin severing and bundling protein villin, binds calcium ions and actin monomers. To begin to understand the contributions of mobility to the villin-calcium and villin-actin interactions, relaxation rates for magnetization involving the amide nitrogens and protons have been measured for 15N-labeled villin 14T in solution. Although we have measured the complete set of rates required for a full spectral density map, difficulties in the accurate measurement of relaxation rates for antiphase coherence and two-spin order led us to consider a reduced mapping formalism. From the reduced spectral density map, a model-free analysis, or directly from the measured Nx,y relaxation rates, local variations in mobility along the backbone of villin 14T have been revealed. Fast motions are evident not only at the amino and carboxyl termini but also in the turn between strands beta 4 and beta 5 of the central beta-sheet and in the turn between helix alpha 3 and strand beta 7. Slower motions are suggested for the turn between strands beta 2 and beta 3. Motions on the microsecond to millisecond time scale have been probed directly by examining the dependence of the proton transverse relaxation rate on the spin-locking field strength. Leu11 shows a strong dependence on field strength, implying conformational exchange with a time constant of 125 +/- 69 microseconds. The backbone at the actin-binding interface appears to be rather rigid.

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Year:  1996        PMID: 8639651     DOI: 10.1021/bi951933o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Protein-ligand interactions measured by 15N-filtered diffusion experiments.

Authors:  M L Tillett; M A Horsfield; L Y Lian; T J Norwood
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

2.  Solution structure, dynamics and thermodynamics of the three SH3 domains of CD2AP.

Authors:  Jose L Ortega Roldan; Martin Blackledge; Nico A J van Nuland; Ana I Azuaga
Journal:  J Biomol NMR       Date:  2011-04-26       Impact factor: 2.835

3.  Elucidating the mechanism of familial amyloidosis- Finnish type: NMR studies of human gelsolin domain 2.

Authors:  S L Kazmirski; M J Howard; R L Isaacson; A R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-26       Impact factor: 11.205

4.  Refined structure of villin 14T and a detailed comparison with other actin-severing domains.

Authors:  M A Markus; P Matsudaira; G Wagner
Journal:  Protein Sci       Date:  1997-06       Impact factor: 6.725

5.  The counterreceptor binding site of human CD2 exhibits an extended surface patch with multiple conformations fluctuating with millisecond to microsecond motions.

Authors:  D F Wyss; K T Dayie; G Wagner
Journal:  Protein Sci       Date:  1997-03       Impact factor: 6.725

6.  (13)C-(1)H NMR relaxation and fluorescence anisotropy decay study of tyrosine dynamics in motilin.

Authors:  Peter Damberg; Jüri Jarvet; Peter Allard; Ulo Mets; Rudolf Rigler; Astrid Gräslund
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

7.  Refined solution structure and backbone dynamics of 15N-labeled C12A-p8MTCP1 studied by NMR relaxation.

Authors:  P Barthe; L Chiche; N Declerck; M A Delsuc; J F Lefèvre; T Malliavin; J Mispelter; M H Stern; J M Lhoste; C Roumestand
Journal:  J Biomol NMR       Date:  1999-12       Impact factor: 2.835

  7 in total

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