Literature DB >> 9070436

The counterreceptor binding site of human CD2 exhibits an extended surface patch with multiple conformations fluctuating with millisecond to microsecond motions.

D F Wyss1, K T Dayie, G Wagner.   

Abstract

We have used 15N NMR relaxation experiments to probe, for the glycosylated human CD2 adhesion domain, the overall molecular motion, as well as very fast nanosecond-picosecond (ns-ps) and slow millisecond-microsecond (ms-microsecond) internal motions. Using a novel analysis method that considers all residues, we obtained a correlation time for the overall motion of 9.5 +/- 0.3 ns. Surprisingly, we found a large contiguous patch of residues in the counterreceptor (CD58) binding site of human CD2 exhibiting slow conformational exchange motions (ms-microsecond). On the other hand, almost none of the residues of the CD58 binding side display fast (ns-ps) internal motions of amplitudes larger than what is seen for well-ordered regions of the structure. Residues close to the N-glycosylation site, and the first N-acetylglucosamine of the high mannose glycan are as rigid as the protein core. Residues conserved in the immunoglobulin superfamily V-set domain are generally very rigid.

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Year:  1997        PMID: 9070436      PMCID: PMC2143668          DOI: 10.1002/pro.5560060303

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  38 in total

1.  Structure of domain 1 of rat T lymphocyte CD2 antigen.

Authors:  P C Driscoll; J G Cyster; I D Campbell; A F Williams
Journal:  Nature       Date:  1991-10-24       Impact factor: 49.962

Review 2.  The structural biology of CD2.

Authors:  P Moingeon; H C Chang; P H Sayre; L K Clayton; A Alcover; P Gardner; E L Reinherz
Journal:  Immunol Rev       Date:  1989-10       Impact factor: 12.988

3.  CD2-mediated adhesion facilitates T lymphocyte antigen recognition function.

Authors:  P Moingeon; H C Chang; B P Wallner; C Stebbins; A Z Frey; E L Reinherz
Journal:  Nature       Date:  1989-05-25       Impact factor: 49.962

4.  An alternative pathway of T-cell activation: a functional role for the 50 kd T11 sheep erythrocyte receptor protein.

Authors:  S C Meuer; R E Hussey; M Fabbi; D Fox; O Acuto; K A Fitzgerald; J C Hodgdon; J P Protentis; S F Schlossman; E L Reinherz
Journal:  Cell       Date:  1984-04       Impact factor: 41.582

5.  Role of interaction of CD2 molecules with lymphocyte function-associated antigen 3 in T-cell recognition of nominal antigen.

Authors:  S Koyasu; T Lawton; D Novick; M A Recny; R F Siliciano; B P Wallner; E L Reinherz
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

6.  Mapping of the spectral densities of N-H bond motions in eglin c using heteronuclear relaxation experiments.

Authors:  J W Peng; G Wagner
Journal:  Biochemistry       Date:  1992-09-15       Impact factor: 3.162

7.  The T lymphocyte glycoprotein CD2 binds the cell surface ligand LFA-3.

Authors:  P Selvaraj; M L Plunkett; M Dustin; M E Sanders; S Shaw; T A Springer
Journal:  Nature       Date:  1987 Mar 26-Apr 1       Impact factor: 49.962

8.  Characterization of thermotropic state changes in myosin subfragment-1 and heavy meromyosin by UV difference spectroscopy.

Authors:  U Kamath; J W Shriver
Journal:  J Biol Chem       Date:  1989-04-05       Impact factor: 5.157

9.  Structural and binding analysis of a two domain extracellular CD2 molecule.

Authors:  P H Sayre; R E Hussey; H C Chang; T L Ciardelli; E L Reinherz
Journal:  J Exp Med       Date:  1989-03-01       Impact factor: 14.307

10.  Synergistic T cell activation via the physiological ligands for CD2 and the T cell receptor.

Authors:  B E Bierer; A Peterson; J C Gorga; S H Herrmann; S J Burakoff
Journal:  J Exp Med       Date:  1988-09-01       Impact factor: 14.307

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  15 in total

1.  Separating the contributions to 15N transverse relaxation in a fibronectin type III domain.

Authors:  A E Meekhof; S M Freund
Journal:  J Biomol NMR       Date:  1999-05       Impact factor: 2.835

2.  A space-time structure determination of human CD2 reveals the CD58-binding mode.

Authors:  A Kitao; G Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

3.  A dynamically tuned double-stranded RNA binding mechanism for the activation of antiviral kinase PKR.

Authors:  S Nanduri; F Rahman; B R Williams; J Qin
Journal:  EMBO J       Date:  2000-10-16       Impact factor: 11.598

4.  Backbone dynamics of the 8 kDa dynein light chain dimer reveals molecular basis of the protein's functional diversity.

Authors:  Jing-Song Fan; Qiang Zhang; Hidehito Tochio; Mingjie Zhang
Journal:  J Biomol NMR       Date:  2002-06       Impact factor: 2.835

5.  PhosphoThr peptide binding globally rigidifies much of the FHA domain from Arabidopsis receptor kinase-associated protein phosphatase.

Authors:  Zhaofeng Ding; Gui-in Lee; Xiangyang Liang; Fabio Gallazzi; A Arunima; Steven R Van Doren
Journal:  Biochemistry       Date:  2005-08-02       Impact factor: 3.162

6.  Rational design of protein-based MRI contrast agents.

Authors:  Jenny J Yang; Jianhua Yang; Lixia Wei; Omar Zurkiya; Wei Yang; Shunyi Li; Jin Zou; Yubin Zhou; Anna L Wilkins Maniccia; Hui Mao; Fuqiang Zhao; Russell Malchow; Shumin Zhao; Julian Johnson; Xiaoping Hu; Eirik Krogstad; Zhi-Ren Liu
Journal:  J Am Chem Soc       Date:  2008-06-25       Impact factor: 15.419

7.  Secretion, isotopic labeling and deglycosylation of N-acylethanolamine acid amidase for biophysical studies.

Authors:  Spiro Pavlopoulos; Dimitrios N Pelekoudas; Othman Benchama; Catherine M Rawlins; Jeffrey N Agar; Jay M West; Michael Malamas; Nikolai Zvonok; Alexandros Makriyannis
Journal:  Protein Expr Purif       Date:  2017-12-15       Impact factor: 1.650

8.  'Wave-type' structure of a synthetic hexaglycosylated decapeptide: a part of the extracellular domain of human glycophorin A.

Authors:  O Schuster; G Klich; V Sinnwell; H Kränz; H Paulsen; B Meyer
Journal:  J Biomol NMR       Date:  1999-05       Impact factor: 2.835

9.  Isotope labeling of mammalian GPCRs in HEK293 cells and characterization of the C-terminus of bovine rhodopsin by high resolution liquid NMR spectroscopy.

Authors:  Karla Werner; Christian Richter; Judith Klein-Seetharaman; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2007-11-13       Impact factor: 2.835

10.  Effective isotope labeling of proteins in a mammalian expression system.

Authors:  Mallika Sastry; Carole A Bewley; Peter D Kwong
Journal:  Methods Enzymol       Date:  2015-10-23       Impact factor: 1.600

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