Literature DB >> 8594570

The 16S ribosomal RNA mutation database (16SMDB).

K L Triman1.   

Abstract

The 16S ribosomal RNA mutation database (16SMDB) provides a list of mutated positions in 16S ribosomal RNA from Escherichia coli and the identity of each alteration. Information provided for each mutation includes: (i) a brief description of the phenotype(s) associated with each mutation; (ii) whether a mutant phenotype has been detected by in vivo or in vitro methods; (iii) relevant literature citations. The database is available via ftp and on the World Wide Web.

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Year:  1996        PMID： 8594570      PMCID： PMC145603          DOI： 10.1093/nar/24.1.166

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  13 in total

1.  A ribosomal ambiguity mutation in the 530 loop of E. coli 16S rRNA.

Authors:  M O'Connor; H U Göringer; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1992-08-25       Impact factor: 16.971

2.  Pseudoknot in the central domain of small subunit ribosomal RNA is essential for translation.

Authors:  A Vila; J Viril-Farley; W E Tapprich
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-08       Impact factor: 11.205

3.  A mutation at the universally conserved position 529 in Escherichia coli 16S rRNA creates a functional but highly error prone ribosome.

Authors:  U V Santer; J Cekleniak; S Kansil; M Santer; M O'Connor; A E Dahlberg
Journal:  RNA       Date:  1995-03       Impact factor: 4.942

4.  Structural changes in the 530 loop of Escherichia coli 16S rRNA in mutants with impaired translational fidelity.

Authors:  D I Van Ryk; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1995-09-11       Impact factor: 16.971

5.  The 23S Ribosomal RNA Mutation Database (23SMDB).

Authors:  K L Triman
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971

6.  A new mutation in 16S rRNA of Escherichia coli conferring spectinomycin resistance.

Authors:  U Johanson; D Hughes
Journal:  Nucleic Acids Res       Date:  1995-02-11       Impact factor: 16.971

7.  The 16S ribosomal RNA mutation database (16SMDB)

Authors:  K L Triman
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

8.  Role of conserved nucleotides in building the 16S rRNA binding site of E. coli ribosomal protein S8.

Authors:  C Allmang; M Mougel; E Westhof; B Ehresmann; C Ehresmann
Journal:  Nucleic Acids Res       Date:  1994-09-11       Impact factor: 16.971

9.  Spectinomycin interacts specifically with the residues G1064 and C1192 in 16S rRNA, thereby potentially freezing this molecule into an inactive conformation.

Authors:  M F Brink; G Brink; M P Verbeet; H A de Boer
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

10.  Mutational and structural analysis of the RNA binding site for Escherichia coli ribosomal protein S7.

Authors:  F Dragon; C Payant; L Brakier-Gingras
Journal:  J Mol Biol       Date:  1994-11-18       Impact factor: 5.469
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  7 in total

1.  Variable region V1 of Saccharomyces cerevisiae 18S rRNA participates in biogenesis and function of the small ribosomal subunit.

Authors:  R W van Nues; J Venema; R J Planta; H A Raué
Journal:  Chromosoma       Date:  1997-06       Impact factor: 4.316

2.  Expansion of the 16S and 23S ribosomal RNA mutation databases (16SMDB and 23SMDB).

Authors:  K L Triman; B J Adams
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

3.  Molecular evolution of Mycoplasma capricolum subsp. capripneumoniae strains, based on polymorphisms in the 16S rRNA genes.

Authors:  B Pettersson; G Bölske; F Thiaucourt; M Uhlén; K E Johansson
Journal:  J Bacteriol       Date:  1998-05       Impact factor: 3.490

4.  The 23S Ribosomal RNA Mutation Database (23SMDB).

Authors:  K L Triman
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971

5.  Expanded versions of the 16S and 23S ribosomal RNA mutation databases (16SMDBexp and 23SMDBexp)

Authors:  K L Triman; A Peister; R A Goel
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

6.  Acquired genetic mechanisms of a multiresistant bacterium isolated from a treatment plant receiving wastewater from antibiotic production.

Authors:  Anna Johnning; Edward R B Moore; Liselott Svensson-Stadler; Yogesh S Shouche; D G Joakim Larsson; Erik Kristiansson
Journal:  Appl Environ Microbiol       Date:  2013-09-13       Impact factor: 4.792

7.  Identification of nine sequence types of the 16S rRNA genes of Campylobacter jejuni subsp. jejuni isolated from broilers.

Authors:  Ingrid Hansson; Marianne Persson; Linda Svensson; Eva Olsson Engvall; Karl-Erik Johansson
Journal:  Acta Vet Scand       Date:  2008-05-21       Impact factor: 1.695
  7 in total

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