Literature DB >> 8593686

Organisation of the mitochondrial genome of Trichophyton rubrum. DNA sequence analysis of the ND4 gene, the ATPase subunit-6 gene, the ribosomal RNA small-subunit gene, the ND6 gene, the COXIII gene, the ATPase subunit-8 gene and six tRNA genes that correspond respectively to the tyrosine, lysine, glutamine, asparagine, isoleucine and tryptophan isoacceptors.

C de Bièvre1, B Dujon.   

Abstract

We present the nucleotide sequence of a 5207-bp-long region of the mitochondrial genome of the dermatophyte Trichophyton rubrum. This represents about 1/5th of the total genome and extends a previous study. From the 5' end of the present sequence, the order of genes is as follows: the end of the ND4 gene, the gene coding for subunit 6 of ATPase, the gene coding for the small ribosomal RNA (SSU rRNA), the tyrosyl tRNA gene, the ND6 gene, the COXIII gene, the ATPase 8 subunit gene and a cluster of tRNAs genes corresponding respectively to the lysine, glutamine, asparagine, isoleucine and tryptophan isoacceptors. The interesting features of this region are its compact organisation, the presence of subunit 8 of the ATPase gene and the secondary structure of SSU rRNA which is close to that of Aspergillus nidulans. On the basis of the order of the genes, which is essentially similar to that of A. nidulans, we can also assume that the LSU rRNA subunit gene should be just upstream of this sequenced region.

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Year:  1995        PMID: 8593686     DOI: 10.1007/bf00518168

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  11 in total

1.  Compilation of small ribosomal subunit RNA sequences.

Authors:  P De Rijk; J M Neefs; Y Van de Peer; R De Wachter
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

2.  Database on the structure of large ribosomal subunit RNA.

Authors:  P De Rijk; Y Van de Peer; S Chapelle; R De Wachter
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

3.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  S Steinberg; A Misch; M Sprinzl
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

4.  Compilation of small ribosomal subunit RNA structures.

Authors:  J M Neefs; Y Van de Peer; P De Rijk; S Chapelle; R De Wachter
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

5.  Two intervening sequences in the ATPase subunit 6 gene of Neurospora crassa. A short intron (93 base-pairs) and a long intron that is stable after excision.

Authors:  G Morelli; G Macino
Journal:  J Mol Biol       Date:  1984-09-25       Impact factor: 5.469

6.  Biogenesis of mitochondria: the mitochondrial gene (aap1) coding for mitochondrial ATPase subunit 8 in Saccharomyces cerevisiae.

Authors:  I G Macreadie; C E Novitski; R J Maxwell; U John; B G Ooi; G L McMullen; H B Lukins; A W Linnane; P Nagley
Journal:  Nucleic Acids Res       Date:  1983-07-11       Impact factor: 16.971

7.  Mitochondrial tRNA gene clusters in Aspergillus nidulans: organization and nucleotide sequence.

Authors:  H G Köchel; C M Lazarus; N Basak; H Küntzel
Journal:  Cell       Date:  1981-02       Impact factor: 41.582

8.  Nucleotide sequence of Aspergillus nidulans mitochondrial genes coding for ATPase subunit 6, cytochrome oxidase subunit 3, seven unidentified proteins, four tRNAs and L-rRNA.

Authors:  R Netzker; H G Köchel; N Basak; H Küntzel
Journal:  Nucleic Acids Res       Date:  1982-08-11       Impact factor: 16.971

9.  Nucleotide sequence of a region of the mitochondrial genome of Aspergillus nidulans including the gene for ATPase subunit 6.

Authors:  E Grisi; T A Brown; R B Waring; C Scazzocchio; R W Davies
Journal:  Nucleic Acids Res       Date:  1982-06-11       Impact factor: 16.971

10.  Nucleotide sequence of the Aspergillus nidulans mitochondrial gene coding for the small ribosomal subunit RNA: homology to E. coli 16S rRNA.

Authors:  H G Köchel; H Küntzel
Journal:  Nucleic Acids Res       Date:  1981-11-11       Impact factor: 16.971

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  1 in total

1.  Recent dermatophyte divergence revealed by comparative and phylogenetic analysis of mitochondrial genomes.

Authors:  Yuan Wu; Jian Yang; Fan Yang; Tao Liu; Wenchuan Leng; Yonglie Chu; Qi Jin
Journal:  BMC Genomics       Date:  2009-05-21       Impact factor: 3.969

  1 in total

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