Literature DB >> 6273804

Nucleotide sequence of the Aspergillus nidulans mitochondrial gene coding for the small ribosomal subunit RNA: homology to E. coli 16S rRNA.

H G Köchel, H Küntzel.   

Abstract

The complete primary structure of the 1437 bp gene coding for mitochondrial 15S rRNA and its flanking regions was determined by Maxam-Gilbert sequencing of cloned HindIII fragment H3 of A. nidulans mtDNA. The gene product reveals significant homology (59%) to E. coli 16S rRNA, and the potential secondary structures of both rRNA molecules are very similar, except that the hairpin structures 7, 8 and 30 of the Brimacombe 16S rRNA model are deleted, and that two sequences of 8 and 31 nucleotides are inserted in the mitochondrial species.

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Year:  1981        PMID: 6273804      PMCID: PMC327553          DOI: 10.1093/nar/9.21.5689

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  14 in total

1.  Restriction endonuclease cleavage map of mitochondrial DNA from Aspergillus nidulans.

Authors:  P P Stepień; U Bernard; H J Cooke; H Küntzel
Journal:  Nucleic Acids Res       Date:  1978-02       Impact factor: 16.971

2.  Distinctive sequence of human mitochondrial ribosomal RNA genes.

Authors:  I C Eperon; S Anderson; D P Nierlich
Journal:  Nature       Date:  1980-07-31       Impact factor: 49.962

3.  The cloning of Aspergillus nidulans mitochondrial DNA in Escherichia coli on plasmid pBR322.

Authors:  E Bartnik; A W Biderman; U Hahn; H Küntzel; P P Stepień
Journal:  Mol Gen Genet       Date:  1981

4.  [Nucleotide sequence of the gene for the mitochondrial 15S ribosomal RNA of yeast].

Authors:  F Sor; H Fukuhara
Journal:  C R Seances Acad Sci D       Date:  1980-12-08

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

6.  Mitochondrial tRNA gene clusters in Aspergillus nidulans: organization and nucleotide sequence.

Authors:  H G Köchel; C M Lazarus; N Basak; H Küntzel
Journal:  Cell       Date:  1981-02       Impact factor: 41.582

7.  Secondary structure comparisons between small subunit ribosomal RNA molecules from six different species.

Authors:  C Zwieb; C Glotz; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1981-08-11       Impact factor: 16.971

8.  Physical map of Aspergillus nidulans mitochondrial genes coding for ribosomal RNA: an intervening sequence in the large rRNA cistron.

Authors:  C M Lazarus; H Lünsdorf; U Hahn; P P Stepień; H Küntzel
Journal:  Mol Gen Genet       Date:  1980-02

9.  Nucleotide sequence of Xenopus laevis 18S ribosomal RNA inferred from gene sequence.

Authors:  M Salim; B E Maden
Journal:  Nature       Date:  1981-05-21       Impact factor: 49.962

10.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.

Authors:  J Shine; L Dalgarno
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

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  22 in total

1.  Compilation of small ribosomal subunit RNA sequences.

Authors:  E Huysmans; R De Wachter
Journal:  Nucleic Acids Res       Date:  1986       Impact factor: 16.971

2.  Unexpectedly long 14S ribosomal RNA gene in Tetrahymena mitochondria.

Authors:  J Labriola; I Weiss; J Zapatero; Y Suyama
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

Review 3.  Structure and function of ribosomal RNA.

Authors:  R Brimacombe; W Stiege
Journal:  Biochem J       Date:  1985-07-01       Impact factor: 3.857

4.  Nucleotide sequence and evolution of the 18S ribosomal RNA gene in maize mitochondria.

Authors:  S Chao; R Sederoff; C S Levings
Journal:  Nucleic Acids Res       Date:  1984-08-24       Impact factor: 16.971

5.  Further characterization of the extremely small mitochondrial ribosomal RNAs from trypanosomes: a detailed comparison of the 9S and 12S RNAs from Crithidia fasciculata and Trypanosoma brucei with rRNAs from other organisms.

Authors:  P Sloof; J Van den Burg; A Voogd; R Benne; M Agostinelli; P Borst; R Gutell; H Noller
Journal:  Nucleic Acids Res       Date:  1985-06-11       Impact factor: 16.971

6.  Nucleotide sequence of a crustacean 18S ribosomal RNA gene and secondary structure of eukaryotic small subunit ribosomal RNAs.

Authors:  L Nelles; B L Fang; G Volckaert; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1984-12-11       Impact factor: 16.971

7.  Organization of the mitochondrial ribosomal RNA genes of maize.

Authors:  D B Stern; T A Dyer; D M Lonsdale
Journal:  Nucleic Acids Res       Date:  1982-06-11       Impact factor: 16.971

8.  Functional conservation near the 3' end of eukaryotic small subunit RNA: photochemical crosslinking of P site-bound acetylvalyl-tRNA to 18S RNA of yeast ribosomes.

Authors:  J Ofengand; P Gornicki; K Chakraburtty; K Nurse
Journal:  Proc Natl Acad Sci U S A       Date:  1982-05       Impact factor: 11.205

9.  Xenopus laevis 18S ribosomal RNA: experimental determination of secondary structural elements, and locations of methyl groups in the secondary structure model.

Authors:  J Atmadja; R Brimacombe; B E Maden
Journal:  Nucleic Acids Res       Date:  1984-03-26       Impact factor: 16.971

10.  Nucleotide sequence of a region of the mitochondrial genome of Aspergillus nidulans including the gene for ATPase subunit 6.

Authors:  E Grisi; T A Brown; R B Waring; C Scazzocchio; R W Davies
Journal:  Nucleic Acids Res       Date:  1982-06-11       Impact factor: 16.971

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