Literature DB >> 8522534

Evidence suggesting cis action by the TnaC leader peptide in regulating transcription attenuation in the tryptophanase operon of Escherichia coli.

K Gish1, C Yanofsky.   

Abstract

Expression of the tryptophanase (tna) operon in Escherichia coli is regulated by catabolite repression and transcription attenuation. Elevated levels of tryptophan induce transcription antitermination at one or more Rho factor-dependent termination sites in the leader region of the operon. Induction requires translation of a 24-residue coding region, tnaC, located in the 319-nucleotide transcribed leader region preceding tnaA, the structural gene for tryptophanase. In the present paper, we show that two bacterial species that lack tryptophanase activity, Enterobacter aerogenes and Salmonella typhimurium, allow tryptophanase induction and tna operon regulation when they carry a plasmid containing the E. coli tna operon. The role of tnaC in induction was examined by introducing mutations in a 24-nucleotide segment of tnaC of E. coli surrounding and including the crucial Trp codon 12. Some mutations resulted in a noninducible phenotype; these mostly introduced nonconservative amino acid substitutions in TnaC. Other mutations had little or no effect; these generally were in third positions of codons or introduced conservative amino acid replacements. A tryptophan-inserting, UGA-reading glutamine suppressor tRNA was observed to restore partial regulation when Trp codon 12 of tnaC was changed to UGA. Stop codons introduced downstream of Trp codon 12 in all three reading frames established that induction requires translation in the natural tnaC reading frame. Our findings suggest that the TnaC leader peptide acts in cis to prevent Rho-dependent termination.

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Year:  1995        PMID: 8522534      PMCID: PMC177606          DOI: 10.1128/jb.177.24.7245-7254.1995

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  44 in total

1.  Selection of mutants of Escherichia coli constitutive for tryptophanase.

Authors:  H NG; T K GARTNER
Journal:  J Bacteriol       Date:  1963-01       Impact factor: 3.490

2.  Transcriptional antitermination in the bgl operon of E. coli is modulated by a specific RNA binding protein.

Authors:  F Houman; M R Diaz-Torres; A Wright
Journal:  Cell       Date:  1990-09-21       Impact factor: 41.582

Review 3.  Transcription attenuation.

Authors:  C Yanofsky
Journal:  J Biol Chem       Date:  1988-01-15       Impact factor: 5.157

4.  Reversibility of the tryptophanase reaction: synthesis of tryptophan from indole, pyruvate, and ammonia.

Authors:  T Watanabe; E E Snell
Journal:  Proc Natl Acad Sci U S A       Date:  1972-05       Impact factor: 11.205

5.  Role of leader peptide synthesis in tryptophanase operon expression in Escherichia coli K-12.

Authors:  V Stewart; C Yanofsky
Journal:  J Bacteriol       Date:  1986-07       Impact factor: 3.490

6.  A persistent untranslated sequence within bacteriophage T4 DNA topoisomerase gene 60.

Authors:  W M Huang; S Z Ao; S Casjens; R Orlandi; R Zeikus; R Weiss; D Winge; M Fang
Journal:  Science       Date:  1988-02-26       Impact factor: 47.728

7.  Features of the formate dehydrogenase mRNA necessary for decoding of the UGA codon as selenocysteine.

Authors:  F Zinoni; J Heider; A Böck
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

8.  tRNA(Trp) translation of leader peptide codon 12 and other factors that regulate expression of the tryptophanase operon.

Authors:  P Gollnick; C Yanofsky
Journal:  J Bacteriol       Date:  1990-06       Impact factor: 3.490

9.  Transcription termination at the trp operon attenuators of Escherichia coli and Salmonella typhimurium: RNA secondary structure and regulation of termination.

Authors:  F Lee; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  1977-10       Impact factor: 11.205

10.  Inhibition of expression of the tryptophanase operon in Escherichia coli by extrachromosomal copies of the tna leader region.

Authors:  K Gish; C Yanofsky
Journal:  J Bacteriol       Date:  1993-06       Impact factor: 3.490

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  16 in total

1.  Influence of Escherichia coli DnaK and DnaJ molecular chaperones on tryptophanase (TnaA) amount and GreA, GreB stability.

Authors:  A M Grudniak; B Nowicka-Sans; M Maciag; K I Wolska
Journal:  Folia Microbiol (Praha)       Date:  2004       Impact factor: 2.099

2.  Regulation of the Escherichia coli tna operon: nascent leader peptide control at the tnaC stop codon.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

Review 3.  The ribosome: a metabolite-responsive transcription regulator.

Authors:  Valley Stewart
Journal:  J Bacteriol       Date:  2008-05-16       Impact factor: 3.490

4.  Loss of overproduction of polypeptide release factor 3 influences expression of the tryptophanase operon of Escherichia coli.

Authors:  C Yanofsky; V Horn; Y Nakamura
Journal:  J Bacteriol       Date:  1996-07       Impact factor: 3.490

Review 5.  Ribosome regulation by the nascent peptide.

Authors:  P S Lovett; E J Rogers
Journal:  Microbiol Rev       Date:  1996-06

6.  Roles of the tnaC-tnaA spacer region and Rho factor in regulating expression of the tryptophanase operon of Proteus vulgaris.

Authors:  A V Kamath; C Yanofsky
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

7.  The mechanism of tryptophan induction of tryptophanase operon expression: tryptophan inhibits release factor-mediated cleavage of TnaC-peptidyl-tRNA(Pro).

Authors:  F Gong; K Ito; Y Nakamura; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

8.  A method for selecting cis-acting regulatory sequences that respond to small molecule effectors.

Authors:  Ular Allas; Tanel Tenson
Journal:  BMC Mol Biol       Date:  2010-08-10       Impact factor: 2.946

9.  Overexpression of tnaC of Escherichia coli inhibits growth by depleting tRNA2Pro availability.

Authors:  Ming Gong; Feng Gong; Charles Yanofsky
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

10.  Conserved residues Asp16 and Pro24 of TnaC-tRNAPro participate in tryptophan induction of Tna operon expression.

Authors:  Luis R Cruz-Vera; Charles Yanofsky
Journal:  J Bacteriol       Date:  2008-04-18       Impact factor: 3.490

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