Literature DB >> 8682777

Loss of overproduction of polypeptide release factor 3 influences expression of the tryptophanase operon of Escherichia coli.

C Yanofsky1, V Horn, Y Nakamura.   

Abstract

Expression of the tryptophanase (tna) operon of Escherichia coli is regulated by catabolite repression and by tryptophan-induced inhibition of Rho-mediated transcription termination. Previous studies indicated that tryptophan induction might involve leader peptide inhibition of ribosome release at the stop codon of tnaC, the coding region for the operon-specified leader peptide. In this study we examined tna operon expression in strains in which the structural gene for protein release factor 3, prfC, is either disrupted or overexpressed. We find that prfC inactivation leads to a two- to threefold increase in basal expression of the tna operon and a slight increase in induced expression. Overexpression of prfC has the opposite effect and reduces both basal and induced expression. These effects occur in the presence of glucose and cyclic AMP, and thus Rho-dependent termination rather than catabolite repression appears to be the event influenced by the prfC alterations. prfC inactivation also leads to an increase in basal tna operon expression in various rho and rpoB mutants but not in a particular rho mutant in which the basal level of expression is very high. The effect of prfC inactivation was examined in a variety of mutants with alterations in the tna leader region. Our results suggest that translation of tnaC is essential for the prfC effect. The tryptophan residue specified by tnaC codon 12, which is essential for induction, when replaced by another amino) acid, allows the prfC effect. Introducing UAG or UAA stop codons rather than the normal tnaC UGA stop codon, in a strain with an inactive prfC gene, also leads to an increase in the basal level of expression. Addition of the drug bicyclomycin increases basal operon expression of all mutant strains except a strain with a tnaC'-'lacZ fusion. Expression in the latter strain is unaffected by prfC alterations. Our findings are consistent with the interpretation that ribosome release at the tnaC stop codon can influence tna operon expression.

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Year:  1996        PMID: 8682777      PMCID: PMC232633          DOI: 10.1128/jb.178.13.3755-3762.1996

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  31 in total

1.  Effects of the antiterminator BoxA on transcription elongation kinetics and ppGpp inhibition of transcription elongation in Escherichia coli.

Authors:  U Vogel; K F Jensen
Journal:  J Biol Chem       Date:  1995-08-04       Impact factor: 5.157

2.  Structural and functional analyses of the transcription-translation proteins NusB and NusE.

Authors:  D L Court; T A Patterson; T Baker; N Costantino; X Mao; D I Friedman
Journal:  J Bacteriol       Date:  1995-05       Impact factor: 3.490

3.  Function of polypeptide chain release factor RF-3 in Escherichia coli. RF-3 action in termination is predominantly at UGA-containing stop signals.

Authors:  G Grentzmann; D Brechemier-Baey; V Heurgué-Hamard; R H Buckingham
Journal:  J Biol Chem       Date:  1995-05-05       Impact factor: 5.157

4.  NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator.

Authors:  C M Burns; J P Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-23       Impact factor: 11.205

5.  The concentration of polypeptide chain release factors 1 and 2 at different growth rates of Escherichia coli.

Authors:  F M Adamski; K K McCaughan; F Jørgensen; C G Kurland; W P Tate
Journal:  J Mol Biol       Date:  1994-05-06       Impact factor: 5.469

6.  Direct recognition of mRNA stop signals by Escherichia coli polypeptide chain release factor two.

Authors:  C M Brown; W P Tate
Journal:  J Biol Chem       Date:  1994-12-30       Impact factor: 5.157

7.  Bicyclomycin sensitivity and resistance affect Rho factor-mediated transcription termination in the tna operon of Escherichia coli.

Authors:  C Yanofsky; V Horn
Journal:  J Bacteriol       Date:  1995-08       Impact factor: 3.490

8.  Comparative characterization of release factor RF-3 genes of Escherichia coli, Salmonella typhimurium, and Dichelobacter nodosus.

Authors:  Y Kawazu; K Ito; K Matsumura; Y Nakamura
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

9.  Mechanism of catabolite repression of tryptophanase synthesis in Escherichia coli.

Authors:  H Isaacs; D Chao; C Yanofsky; M H Saier
Journal:  Microbiology       Date:  1994-08       Impact factor: 2.777

10.  Identification of the prfC gene, which encodes peptide-chain-release factor 3 of Escherichia coli.

Authors:  O Mikuni; K Ito; J Moffat; K Matsumura; K McCaughan; T Nobukuni; W Tate; Y Nakamura
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-21       Impact factor: 11.205

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  11 in total

1.  Ribosome recycling factor and release factor 3 action promotes TnaC-peptidyl-tRNA Dropoff and relieves ribosome stalling during tryptophan induction of tna operon expression in Escherichia coli.

Authors:  Ming Gong; Luis R Cruz-Vera; Charles Yanofsky
Journal:  J Bacteriol       Date:  2007-02-09       Impact factor: 3.490

2.  Regulation of the Escherichia coli tna operon: nascent leader peptide control at the tnaC stop codon.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

Review 3.  The ribosome: a metabolite-responsive transcription regulator.

Authors:  Valley Stewart
Journal:  J Bacteriol       Date:  2008-05-16       Impact factor: 3.490

Review 4.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

5.  Release factor RF-3 GTPase activity acts in disassembly of the ribosome termination complex.

Authors:  G Grentzmann; P J Kelly; S Laalami; M Shuda; M A Firpo; Y Cenatiempo; A Kaji
Journal:  RNA       Date:  1998-08       Impact factor: 4.942

6.  Roles of the tnaC-tnaA spacer region and Rho factor in regulating expression of the tryptophanase operon of Proteus vulgaris.

Authors:  A V Kamath; C Yanofsky
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

7.  The mechanism of tryptophan induction of tryptophanase operon expression: tryptophan inhibits release factor-mediated cleavage of TnaC-peptidyl-tRNA(Pro).

Authors:  F Gong; K Ito; Y Nakamura; C Yanofsky
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

8.  Role of ribosome release in regulation of tna operon expression in Escherichia coli.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  1999-03       Impact factor: 3.490

9.  Rho-dependent transcription termination in the tna operon of Escherichia coli: roles of the boxA sequence and the rut site.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  2000-07       Impact factor: 3.490

10.  The tryptophanase gene cluster of Haemophilus influenzae type b: evidence for horizontal gene transfer.

Authors:  K Martin; G Morlin; A Smith; A Nordyke; A Eisenstark; M Golomb
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

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