Literature DB >> 9045841

Roles of the tnaC-tnaA spacer region and Rho factor in regulating expression of the tryptophanase operon of Proteus vulgaris.

A V Kamath1, C Yanofsky.   

Abstract

To localize the DNA regions responsible for basal-level and induced expression of the tryptophanase (tna) operon of Proteus vulgaris, short deletions were introduced in the 115-bp spacer region separating tnaC, the leader peptide coding region, from tnaA. Deletions were incorporated into a tnaA'-'lacZ reporter construct containing the intact tna promoter-leader region. Expression was examined in Escherichia coli. Deletions that removed 28 to 30 bp from the region immediately following tnaC increased basal-level expression about threefold and allowed threefold induction by 1-methyltryptophan. A deletion removing 34 bp from the distal segment of the leader permitted basal and induced expression comparable to that of the parental construct. The mutant with the largest spacer deletion, 89 bp, exhibited a 30-fold increase in basal-level expression, and most importantly, inducer presence reduced operon expression by ca. 60%. Replacing the tnaC start codon or replacing or removing Trp codon 20 of tnaC of this deletion derivative eliminated inducer inhibition of expression. These findings suggest that the spacer region separating tnaC and tnaA is essential for Rho action. They also suggest that juxtaposition of the tnaC stop codon and the tnaA ribosome binding site in the 89-bp deletion derivative allows the ribosome that has completed translation of tnaC to inhibit translation initiation at the tnaA start codon when cells are exposed to inducer. These findings are consistent with results in the companion article that suggest that inducer allows the TnaC peptide to inhibit ribosome release at the tnaC stop codon.

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Year:  1997        PMID: 9045841      PMCID: PMC178894          DOI: 10.1128/jb.179.5.1780-1786.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  34 in total

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Authors:  P Alifano; F Rivellini; D Limauro; C B Bruni; M S Carlomagno
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Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-15       Impact factor: 11.205

4.  Rho-dependent transcription termination. Characterization of the requirement for cytidine in the nascent transcript.

Authors:  C M Hart; J W Roberts
Journal:  J Biol Chem       Date:  1991-12-15       Impact factor: 5.157

5.  Sequence elements essential for rho-dependent transcription termination at lambda tR1.

Authors:  C Y Chen; J P Richardson
Journal:  J Biol Chem       Date:  1987-08-15       Impact factor: 5.157

6.  The "megaprimer" method of site-directed mutagenesis.

Authors:  G Sarkar; S S Sommer
Journal:  Biotechniques       Date:  1990-04       Impact factor: 1.993

7.  Role of leader peptide synthesis in tryptophanase operon expression in Escherichia coli K-12.

Authors:  V Stewart; C Yanofsky
Journal:  J Bacteriol       Date:  1986-07       Impact factor: 3.490

8.  Evidence for transcription antitermination control of tryptophanase operon expression in Escherichia coli K-12.

Authors:  V Stewart; C Yanofsky
Journal:  J Bacteriol       Date:  1985-11       Impact factor: 3.490

Review 9.  Protein-nucleic acid interactions in transcription: a molecular analysis.

Authors:  P H von Hippel; D G Bear; W D Morgan; J A McSwiggen
Journal:  Annu Rev Biochem       Date:  1984       Impact factor: 23.643

10.  tRNA(Trp) translation of leader peptide codon 12 and other factors that regulate expression of the tryptophanase operon.

Authors:  P Gollnick; C Yanofsky
Journal:  J Bacteriol       Date:  1990-06       Impact factor: 3.490

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  7 in total

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Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

Review 2.  The ribosome: a metabolite-responsive transcription regulator.

Authors:  Valley Stewart
Journal:  J Bacteriol       Date:  2008-05-16       Impact factor: 3.490

3.  Recognition of the regulatory nascent chain TnaC by the ribosome.

Authors:  Leonardo G Trabuco; Christopher B Harrison; Eduard Schreiner; Klaus Schulten
Journal:  Structure       Date:  2010-05-12       Impact factor: 5.006

4.  Role of ribosome release in regulation of tna operon expression in Escherichia coli.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  1999-03       Impact factor: 3.490

5.  Rho-dependent transcription termination in the tna operon of Escherichia coli: roles of the boxA sequence and the rut site.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  2000-07       Impact factor: 3.490

6.  The tryptophanase gene cluster of Haemophilus influenzae type b: evidence for horizontal gene transfer.

Authors:  K Martin; G Morlin; A Smith; A Nordyke; A Eisenstark; M Golomb
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

7.  Interactions of the TnaC nascent peptide with rRNA in the exit tunnel enable the ribosome to respond to free tryptophan.

Authors:  Allyson K Martínez; Emily Gordon; Arnab Sengupta; Nitin Shirole; Dorota Klepacki; Blanca Martinez-Garriga; Lewis M Brown; Michael J Benedik; Charles Yanofsky; Alexander S Mankin; Nora Vazquez-Laslop; Matthew S Sachs; Luis R Cruz-Vera
Journal:  Nucleic Acids Res       Date:  2013-10-16       Impact factor: 16.971

  7 in total

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