Literature DB >> 8521845

The phosphoglycerate kinase and glyceraldehyde-3-phosphate dehydrogenase genes from the thermophilic archaeon Sulfolobus solfataricus overlap by 8-bp. Isolation, sequencing of the genes and expression in Escherichia coli.

C E Jones1, T M Fleming, D A Cowan, J A Littlechild, P W Piper.   

Abstract

The overlapping genes encoding phosphoglycerate kinase (PGK) and glyceraldehyde-3-phosphate dehydrogenase (GraP-DH) from the hyperthermophilic archaeon Sulfolobus solfataricus have been cloned and sequenced. PCR primers based on highly conserved regions of different PGK sequences were used to isolate an internal region of the pgk gene. This was then used to screen a genomic library to isolate the full length pgk gene. A 2.5-kb BglII fragment of S. solfataricus DNA contained both the pgk gene and the gap gene immediately downstream. Unexpectedly, the pgk and gap genes were found to overlap by 8 bp, with the initiation codon of the gap gene preceding the termination codon of the pgk gene. Evidence that the two genes are co-transcribed was obtained by Northern-blot analysis. The S. solfataricus PGK amino acid sequence shows 43% and 45% identity to the PGK sequences of the Archaea Methanobacterium bryantii and Methanothermus fervidus, respectively. High level expression of the S. solfataricus PGK and GraP-DH in Escherichia coli was achieved, with heat treatment at 80 degrees C proving an effective first step in the purification of these recombinant enzymes from extracts of the E. coli host. Purified recombinant S. solfataricus PGK and GraP-DH showed half lives of 39 min and 17 h, respectively, at 80 degrees C. Unlike bacterial GraP-DH enzymes, S. solfataricus GraP-DH was able to use both NAD+ and NADP+ as cofactors, but exhibited a marked preference for NADP+.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 8521845     DOI: 10.1111/j.1432-1033.1995.800_3.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  10 in total

Review 1.  The unique features of glycolytic pathways in Archaea.

Authors:  Corné H Verhees; Servé W M Kengen; Judith E Tuininga; Gerrit J Schut; Michael W W Adams; Willem M De Vos; John Van Der Oost
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

Review 2.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

3.  Phosphoglycerate kinase: structural aspects and functions, with special emphasis on the enzyme from Kinetoplastea.

Authors:  Maura Rojas-Pirela; Diego Andrade-Alviárez; Verónica Rojas; Ulrike Kemmerling; Ana J Cáceres; Paul A Michels; Juan Luis Concepción; Wilfredo Quiñones
Journal:  Open Biol       Date:  2020-11-25       Impact factor: 6.411

4.  Pcal_0632, a phosphorylating glyceraldehyde-3-phosphate dehydrogenase from Pyrobaculum calidifontis.

Authors:  Iram Aziz; Naeem Rashid; Raza Ashraf; Masood Ahmed Siddiqui; Tadayuki Imanaka; Muhammad Akhtar
Journal:  Extremophiles       Date:  2017-11-25       Impact factor: 2.395

Review 5.  Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism.

Authors:  Ron S Ronimus; Hugh W Morgan
Journal:  Archaea       Date:  2003-10       Impact factor: 3.273

6.  Labeling and enzyme studies of the central carbon metabolism in Metallosphaera sedula.

Authors:  Sebastian Estelmann; Michael Hügler; Wolfgang Eisenreich; Katharina Werner; Ivan A Berg; W Hugo Ramos-Vera; Rafael F Say; Daniel Kockelkorn; Nasser Gad'on; Georg Fuchs
Journal:  J Bacteriol       Date:  2010-12-17       Impact factor: 3.490

7.  Biochemical characterization of glyceraldehyde-3-phosphate dehydrogenase from Thermococcus kodakarensis KOD1.

Authors:  Baolei Jia; Le Thuy Linh; Sangmin Lee; Bang Phuong Pham; Jinliang Liu; Hongyu Pan; Shihong Zhang; Gang-Won Cheong
Journal:  Extremophiles       Date:  2011-03-16       Impact factor: 2.395

Review 8.  Overlapping genes in natural and engineered genomes.

Authors:  Bradley W Wright; Mark P Molloy; Paul R Jaschke
Journal:  Nat Rev Genet       Date:  2021-10-05       Impact factor: 59.581

9.  A method for the simultaneous estimation of selection intensities in overlapping genes.

Authors:  Niv Sabath; Giddy Landan; Dan Graur
Journal:  PLoS One       Date:  2008-12-22       Impact factor: 3.240

10.  Characterization of 3-phosphoglycerate kinase from Corynebacterium glutamicum and its impact on amino acid production.

Authors:  Gajendar Komati Reddy; Volker F Wendisch
Journal:  BMC Microbiol       Date:  2014-03-04       Impact factor: 3.605

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.