Literature DB >> 29177716

Pcal_0632, a phosphorylating glyceraldehyde-3-phosphate dehydrogenase from Pyrobaculum calidifontis.

Iram Aziz1, Naeem Rashid2, Raza Ashraf1, Masood Ahmed Siddiqui3, Tadayuki Imanaka4, Muhammad Akhtar1,5.   

Abstract

Genome sequence of the hyperthermophilic archaeon Pyrobaculum calidifontis contains an open reading frame, Pcal_0632, annotated as glyceraldehyde-3-phosphate dehydrogenase, which is partially overlapped with phosphoglycerate kinase. In the phylogenetic tree, Pcal_0632 clustered with phosphorylating glyceraldehyde-3-phosphate dehydrogenases characterized from hyperthermophilic archaea and exhibited highest identity of 54% with glyceraldehyde-3-phosphate dehydrogenase from Sulfolobus tokodaii. To examine biochemical function of the protein, Pcal_0632 gene was expressed in Escherichia coli and the gene product was purified. The recombinant enzyme catalyzed the conversion of glyceraldehyde 3-phosphate and inorganic phosphate into 1,3-bisphosphoglycerate utilizing both NAD and NADP as cofactor with a marked preference for NADP. The enzyme was highly stable against temperature and denaturants. Half-life of the enzyme was 60 min at 100 °C. It retained more than 60% of its activity even after an incubation of 72 h at room temperature in the presence of 6 M urea. High thermostability and resistance against denaturants make Pcal_0632 a novel glyceraldehyde-3-phosphate dehydrogenase.

Entities:  

Keywords:  Denaturant resistance; Glyceraldehyde-3-phosphate dehydrogenase; Phosphorylating; Pyrobaculum calidifontis; Thermostable

Mesh:

Substances:

Year:  2017        PMID: 29177716     DOI: 10.1007/s00792-017-0982-7

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  31 in total

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3.  Purification and characterization of D-glyceraldehyde-3-phosphate dehydrogenase from the thermophilic archaebacterium Methanothermus fervidus.

Authors:  S Fabry; R Hensel
Journal:  Eur J Biochem       Date:  1987-05-15

4.  Crystal structure of the glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  M N Isupov; T M Fleming; A R Dalby; G S Crowhurst; P C Bourne; J A Littlechild
Journal:  J Mol Biol       Date:  1999-08-20       Impact factor: 5.469

5.  Glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaebacterium Pyrococcus woesei: characterization of the enzyme, cloning and sequencing of the gene, and expression in Escherichia coli.

Authors:  P Zwickl; S Fabry; C Bogedain; A Haas; R Hensel
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

6.  Biochemical characterization of glyceraldehyde-3-phosphate dehydrogenase from Thermococcus kodakarensis KOD1.

Authors:  Baolei Jia; Le Thuy Linh; Sangmin Lee; Bang Phuong Pham; Jinliang Liu; Hongyu Pan; Shihong Zhang; Gang-Won Cheong
Journal:  Extremophiles       Date:  2011-03-16       Impact factor: 2.395

7.  Structure of glyceraldehyde-3-phosphate dehydrogenase from the archaeal hyperthermophile Methanocaldococcus jannaschii.

Authors:  Ali D Malay; Yoshitaka Bessho; Mark J Ellis; Svetlana V Antonyuk; Richard W Strange; S Samar Hasnain; Akeo Shinkai; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-11-27

8.  The phosphoglycerate kinase and glyceraldehyde-3-phosphate dehydrogenase genes from the thermophilic archaeon Sulfolobus solfataricus overlap by 8-bp. Isolation, sequencing of the genes and expression in Escherichia coli.

Authors:  C E Jones; T M Fleming; D A Cowan; J A Littlechild; P W Piper
Journal:  Eur J Biochem       Date:  1995-11-01

9.  Urea and guanidinium chloride denature protein L in different ways in molecular dynamics simulations.

Authors:  C Camilloni; A Guerini Rocco; I Eberini; E Gianazza; R A Broglia; G Tiana
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

10.  The Peculiar Glycolytic Pathway in Hyperthermophylic Archaea: Understanding Its Whims by Experimentation In Silico.

Authors:  Yanfei Zhang; Theresa Kouril; Jacky L Snoep; Bettina Siebers; Matteo Barberis; Hans V Westerhoff
Journal:  Int J Mol Sci       Date:  2017-04-20       Impact factor: 5.923

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