Literature DB >> 8506310

Phylogenetic analysis of rbcL sequences identifies Acorus calamus as the primal extant monocotyledon.

M R Duvall1, G H Learn, L E Eguiarte, M T Clegg.   

Abstract

The identity of the oldest lineage of monocotyledons is a subject of debate. Alternative interpretations of morphological homologies are variously consistent with proposals that species of Alismatanae, Dioscoreales, or Melanthiales were the earliest descendants of the first monocotyledons. We present phylogenetic analyses based on DNA sequences of the plastid locus rbcL in which Acorus calamus, an herb with unspecialized floral features and of uncertain affinities, is supported as a member of the oldest extant lineage of monocotyledons. This conclusion is consistent with a substantial body of morphological, anatomical, and embryological evidence and offers an explanation for the failure to identify any close relationship between Acorus and other genera.

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Year:  1993        PMID: 8506310      PMCID: PMC46568          DOI: 10.1073/pnas.90.10.4641

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  Relative rates of nucleotide substitution at the rbcL locus of monocotyledonous plants.

Authors:  B S Gaut; S V Muse; W D Clark; M T Clegg
Journal:  J Mol Evol       Date:  1992-10       Impact factor: 2.395

2.  Molecular evolutionary history of ancient aquatic angiosperms.

Authors:  D H Les; D K Garvin; C F Wimpee
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-15       Impact factor: 11.205

3.  Chloroplast DNA evolves slowly in the palm family (Arecaceae).

Authors:  M A Wilson; B Gaut; M T Clegg
Journal:  Mol Biol Evol       Date:  1990-07       Impact factor: 16.240

4.  Chloroplast DNA sequence from a miocene Magnolia species.

Authors:  E M Golenberg; D E Giannasi; M T Clegg; C J Smiley; M Durbin; D Henderson; G Zurawski
Journal:  Nature       Date:  1990-04-12       Impact factor: 49.962

5.  Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea.

Authors:  H Kishino; M Hasegawa
Journal:  J Mol Evol       Date:  1989-08       Impact factor: 2.395

6.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

7.  Carnivorous plants: phylogeny and structural evolution.

Authors:  V A Albert; S E Williams; M W Chase
Journal:  Science       Date:  1992-09-11       Impact factor: 47.728

  7 in total
  11 in total

1.  Molecular phylogeny of monocotyledons inferred from combined analysis of plastid matK and rbcL gene sequences.

Authors:  Minoru N Tamura; Jun Yamashita; Shizuka Fuse; Masatake Haraguchi
Journal:  J Plant Res       Date:  2004-01-27       Impact factor: 2.629

2.  The complete chloroplast genome of Coix lacryma-jobi and a comparative molecular evolutionary analysis of plastomes in cereals.

Authors:  Charles H Leseberg; Melvin R Duvall
Journal:  J Mol Evol       Date:  2009-09-24       Impact factor: 2.395

3.  Phylogenetic affinities of the grasses to other monocots as revealed by molecular analysis of chloroplast DNA.

Authors:  H Katayama; Y Ogihara
Journal:  Curr Genet       Date:  1996-05       Impact factor: 3.886

4.  Floral structure and development in Nartheciaceae (Dioscoreales), with special reference to ovary position and septal nectaries.

Authors:  Hiroshi Tobe; Yu-Ling Huang; Tomoki Kadokawa; Minoru N Tamura
Journal:  J Plant Res       Date:  2018-03-22       Impact factor: 2.629

5.  Neighboring base composition is strongly correlated with base substitution bias in a region of the chloroplast genome.

Authors:  B R Morton; M T Clegg
Journal:  J Mol Evol       Date:  1995-11       Impact factor: 2.395

6.  rbcL gene sequences provide evidence for the evolutionary lineages of leptosporangiate ferns.

Authors:  M Hasebe; T Omori; M Nakazawa; T Sano; M Kato; K Iwatsuki
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

7.  Widespread genome duplications throughout the history of flowering plants.

Authors:  Liying Cui; P Kerr Wall; James H Leebens-Mack; Bruce G Lindsay; Douglas E Soltis; Jeff J Doyle; Pamela S Soltis; John E Carlson; Kathiravetpilla Arumuganathan; Abdelali Barakat; Victor A Albert; Hong Ma; Claude W dePamphilis
Journal:  Genome Res       Date:  2006-05-15       Impact factor: 9.043

8.  Molecular evolution of the Ac/Ds transposable-element family in pearl millet and other grasses.

Authors:  G A Huttley; A F MacRae; M T Clegg
Journal:  Genetics       Date:  1995-03       Impact factor: 4.562

9.  A functional phylogenomic view of the seed plants.

Authors:  Ernest K Lee; Angelica Cibrian-Jaramillo; Sergios-Orestis Kolokotronis; Manpreet S Katari; Alexandros Stamatakis; Michael Ott; Joanna C Chiu; Damon P Little; Dennis Wm Stevenson; W Richard McCombie; Robert A Martienssen; Gloria Coruzzi; Rob Desalle
Journal:  PLoS Genet       Date:  2011-12-15       Impact factor: 5.917

10.  Plastid Phylogenomic Analyses Resolve Tofieldiaceae as the Root of the Early Diverging Monocot Order Alismatales.

Authors:  Yang Luo; Peng-Fei Ma; Hong-Tao Li; Jun-Bo Yang; Hong Wang; De-Zhu Li
Journal:  Genome Biol Evol       Date:  2016-04-06       Impact factor: 3.416

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