Literature DB >> 8503870

A computer program for the algebraic determination of control coefficients in Metabolic Control Analysis.

S Thomas1, D A Fell.   

Abstract

A computer program (MetaCon) is described for the evaluation of flux control, concentration control and branch-point distribution control coefficients of a metabolic pathway. Requiring only the reaction scheme as input, the program produces algebraic expressions for the control coefficients in terms of elasticity coefficients, metabolite concentrations and pathway fluxes. Any of these variables can be substituted by numeric or simple algebraic expressions; the expressions will then be automatically rearranged in terms of the remaining unknown variables. When all variables have been substituted, numeric values will be obtained for the control coefficients. The program is a computerized implementation of the matrix method for the determination of control coefficients. The features of MetaCon are compared with those of other programs available to workers in Metabolic Control Analysis. Potential benefits of, and methods of using, MetaCon are discussed. The mathematical background and validity of the matrix method rules are discussed, and the algorithm used by MetaCon is described. The matrix method is shown to be a specific case of a previously described general formalism for calculating control coefficients.

Mesh:

Year:  1993        PMID: 8503870      PMCID: PMC1134216          DOI: 10.1042/bj2920351

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  24 in total

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Authors:  R Heinrich; T A Rapoport
Journal:  Biosystems       Date:  1975-07       Impact factor: 1.973

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Authors:  R Heinrich; T A Rapoport
Journal:  Eur J Biochem       Date:  1974-02-15

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Authors:  H M Sauro; J R Small; D A Fell
Journal:  Eur J Biochem       Date:  1987-05-15

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Authors:  J H Hofmeyr; H Kacser; K J van der Merwe
Journal:  Eur J Biochem       Date:  1986-03-17

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Authors:  H V Westerhoff; Y D Chen
Journal:  Eur J Biochem       Date:  1984-07-16

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Authors:  D A Fell; H M Sauro
Journal:  Eur J Biochem       Date:  1985-05-02

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Journal:  Biochem Soc Trans       Date:  1983-01       Impact factor: 5.407

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  2 in total

Review 1.  Evolution of biomolecular networks: lessons from metabolic and protein interactions.

Authors:  Takuji Yamada; Peer Bork
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2.  Metabolic Control Analysis of glycolysis in tuber tissue of potato (Solanum tuberosum): explanation for the low control coefficient of phosphofructokinase over respiratory flux.

Authors:  S Thomas; P J Mooney; M M Burrell; D A Fell
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  2 in total

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