Literature DB >> 3569295

Metabolic control and its analysis. Extensions to the theory and matrix method.

H M Sauro, J R Small, D A Fell.   

Abstract

The matrix algebra procedure for determining the flux control coefficients of enzymes in metabolic pathways has been extended to allow determination of the concentration control coefficients. Although it is shown that the procedure is essentially unchanged in most cases, the presence of moiety-conserved cycles in a pathway places additional limitations on the form of the equations that can be used in the matrix formulation for concentration control coefficients. In the case of branched pathways, a new coefficient has been defined, the branch distribution control coefficient, which can be obtained via the matrix procedure. Thus a single matrix equation permits calculation or algebraic evaluation of the control coefficients for flux, concentration and distribution of flux at branches, so that the complete response of a pathway to alteration of enzyme content, or to modulation by an effector, can be determined. The relationships have been determined between flux control coefficients in isolated sections of metabolic pathways and the coefficients for the same enzymes when part of a larger metabolic system. It is shown that the control analysis of the isolated system provides useful information towards determining the control properties of the extended system.

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Year:  1987        PMID: 3569295     DOI: 10.1111/j.1432-1033.1987.tb11214.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  20 in total

Review 1.  Metabolic control analysis: a survey of its theoretical and experimental development.

Authors:  D A Fell
Journal:  Biochem J       Date:  1992-09-01       Impact factor: 3.857

2.  Metabolic control analysis using transient metabolite concentrations. Determination of metabolite concentration control coefficients.

Authors:  J Delgado; J C Liao
Journal:  Biochem J       Date:  1992-08-01       Impact factor: 3.857

Review 3.  Quantitative approaches to the analysis of the control and regulation of microbial metabolism.

Authors:  H V Westerhoff; W van Heeswijk; D Kahn; D B Kell
Journal:  Antonie Van Leeuwenhoek       Date:  1991 Oct-Nov       Impact factor: 2.271

4.  Control analysis of transition times. Extension of analysis and matrix method.

Authors:  M Cascante; N V Torres; R Franco; E Meléndez-Hevia; E I Canela
Journal:  Mol Cell Biochem       Date:  1991-02-27       Impact factor: 3.396

5.  The control of 5-hydroxytryptamine and dopamine synthesis in the brain: a theoretical approach.

Authors:  F A Hommes; J S Lee
Journal:  J Inherit Metab Dis       Date:  1990       Impact factor: 4.982

6.  A simplified method for calculating complex metabolic sensitivities by using matrix partitioning.

Authors:  B Crabtree; G Collins; M I Franklin
Journal:  Biochem J       Date:  1989-10-01       Impact factor: 3.857

7.  Control analysis of photosynthetic CO2 fixation.

Authors:  C Giersch; D Lämmel; G Farquhar
Journal:  Photosynth Res       Date:  1990-05       Impact factor: 3.573

8.  Study of the flux and transition time control coefficient profiles in a metabolic system in vitro and the effect of an external stimulator.

Authors:  N V Torres; R Souto; E Meléndez-Hevia
Journal:  Biochem J       Date:  1989-06-15       Impact factor: 3.857

9.  Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species.

Authors:  Shiri Freilich; Anat Kreimer; Elhanan Borenstein; Uri Gophna; Roded Sharan; Eytan Ruppin
Journal:  PLoS Comput Biol       Date:  2010-02-26       Impact factor: 4.475

10.  Control and regulation of mitochondrial energetics in an integrated model of cardiomyocyte function.

Authors:  Sonia Cortassa; Brian O'Rourke; Raimond L Winslow; Miguel A Aon
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

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