Literature DB >> 1391687

The definitions of metabolic control analysis revisited.

S Schuster1, R Heinrich.   

Abstract

Various definitions of coefficients in metabolic control analysis are examined with respect to their theoretical consistency and practical applicability. We suggest agreement upon a definition for control coefficients which is clearly distinct from that for response coefficients, in such a way that the former describe inherent properties of the metabolic system while the latter refer to the influence of special parameters. Advantages and drawbacks of using normalized or non-normalized control coefficients are studied. It is shown that normalized control coefficients have the advantage of being invariant to a different rescaling of the particular fluxes. We demonstrate that some problems are easier to tackle if the consistency of time-independent control coefficients with their time-dependent counterparts is taken into account. It is shown that the matrix of flux control coefficients is an indempotent matrix. This allows an interpretation in terms of the transduction of the effect of parameter perturbations. Several aspects of the experimental measurement of control coefficients are discussed, with special reference to the different definitions.

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Year:  1992        PMID: 1391687     DOI: 10.1016/0303-2647(92)90042-w

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  14 in total

1.  Activity and metabolic roles of the pentose phosphate cycle in several rat tissues.

Authors:  H Cabezas; R R Raposo; E Meléndez-Hevia
Journal:  Mol Cell Biochem       Date:  1999-11       Impact factor: 3.396

2.  Evolution of dominance in metabolic pathways.

Authors:  Homayoun C Bagheri; Günter P Wagner
Journal:  Genetics       Date:  2004-11       Impact factor: 4.562

3.  Control theory of metabolic channelling.

Authors:  B N Kholodenko; M Cascante; H V Westerhoff
Journal:  Mol Cell Biochem       Date:  1995-02-23       Impact factor: 3.396

Review 4.  Elusive control.

Authors:  H V Westerhoff; B N Kholodenko; M Cascante; K Van Dam
Journal:  J Bioenerg Biomembr       Date:  1995-10       Impact factor: 2.945

Review 5.  Metabolic regulation: a control analytic perspective.

Authors:  J H Hofmeyr
Journal:  J Bioenerg Biomembr       Date:  1995-10       Impact factor: 2.945

Review 6.  Control and regulation of pathways via negative feedback.

Authors:  Herbert M Sauro
Journal:  J R Soc Interface       Date:  2017-02       Impact factor: 4.118

7.  Control of glycolytic dynamics by hexose transport in Saccharomyces cerevisiae.

Authors:  K A Reijenga; J L Snoep; J A Diderich; H W van Verseveld; H V Westerhoff; B Teusink
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

Review 8.  The emerging paradigm of network medicine in the study of human disease.

Authors:  Stephen Y Chan; Joseph Loscalzo
Journal:  Circ Res       Date:  2012-07-20       Impact factor: 17.367

9.  Fruit setting rewires central metabolism via gibberellin cascades.

Authors:  Yoshihito Shinozaki; Bertrand P Beauvoit; Masaru Takahara; Shuhei Hao; Kentaro Ezura; Marie-Hélène Andrieu; Keiji Nishida; Kazuki Mori; Yutaka Suzuki; Satoshi Kuhara; Hirofumi Enomoto; Miyako Kusano; Atsushi Fukushima; Tetsuya Mori; Mikiko Kojima; Makoto Kobayashi; Hitoshi Sakakibara; Kazuki Saito; Yuya Ohtani; Camille Bénard; Duyen Prodhomme; Yves Gibon; Hiroshi Ezura; Tohru Ariizumi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-03       Impact factor: 11.205

10.  Control analysis applied to the whole body: control by body organs over plasma concentrations and organ fluxes of substances in the blood.

Authors:  G C Brown
Journal:  Biochem J       Date:  1994-01-01       Impact factor: 3.857

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