Literature DB >> 8494899

Effects of amino acid substitutions on the pressure denaturation of staphylococcal nuclease as monitored by fluorescence and nuclear magnetic resonance spectroscopy.

C A Royer1, A P Hinck, S N Loh, K E Prehoda, X Peng, J Jonas, J L Markley.   

Abstract

In the present study we have used high hydrostatic pressure coupled with either time-resolved and steady-state fluorescence or NMR spectroscopy in order to investigate the effects of amino acid substitutions on the high-pressure denaturation properties of staphylococcal nuclease. This protein has been shown previously to be structurally heterogeneous in its native state. On the NMR time scale, four distinct interconverting conformational forms arise from the population of both cis and trans Xaa-Pro peptide bonds (His46-Pro47 and Lys116-Pro117) [Evans et al. (1989) Biochemistry 28, 362; Loh et al. (1991) in Techniques in Protein Chemistry II, pp 275-282, Academic Press, New York]. Mutations in the protein sequence have been shown to change the distribution among the various forms [Alexandrescu et al. (1989) Biochemistry 28, 204; Alexandrescu et al. (1990) Biochemistry 29, 4516]. Time-resolved fluorescence on a series of mutants with altered equilibria for cis/trans isomerism about the 116-117 peptide bond did not reveal any simple relationship between the position of the cis/trans equilibrium in the folded state and the heterogeneity of the fluorescence decay. However, the specific dynamic properties of each mutant, as revealed by time-resolved fluorescence, do appear to be correlated with their partial molar volume changes of denaturation. A striking finding is that mutation of either (or both) of the prolines that exhibits structural heterogeneity to glycine greatly alters the stability of the protein to pressure. These mutations also result in decreased chain mobility as assessed by time-resolved fluorescence. It appears that packing defects, which allow for peptide bond cis/trans heterogeneity in the wild-type protein, are removed by the Pro-->Gly substitutions.

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Year:  1993        PMID: 8494899     DOI: 10.1021/bi00070a034

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  28 in total

1.  Pressure versus temperature unfolding of ribonuclease A: an FTIR spectroscopic characterization of 10 variants at the carboxy-terminal site.

Authors:  J Torrent; P Rubens; M Ribó; K Heremans; M Vilanova
Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

2.  Early formation of a beta hairpin during folding of staphylococcal nuclease H124L as detected by pulsed hydrogen exchange.

Authors:  William F Walkenhorst; Jason A Edwards; John L Markley; Heinrich Roder
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

Review 3.  Diversity in transcripts and translational pattern of stress proteins in marine extremophiles.

Authors:  I V Ambily Nath; P A Loka Bharathi
Journal:  Extremophiles       Date:  2011-01-06       Impact factor: 2.395

4.  The contribution of the residues from the main hydrophobic core of ribonuclease A to its pressure-folding transition state.

Authors:  Josep Font; Antoni Benito; Reinhard Lange; Marc Ribó; Maria Vilanova
Journal:  Protein Sci       Date:  2006-04-05       Impact factor: 6.725

5.  Hydration of the folding transition state ensemble of a protein.

Authors:  Ludovic Brun; Daniel G Isom; Priya Velu; Bertrand García-Moreno; Catherine Ann Royer
Journal:  Biochemistry       Date:  2006-03-21       Impact factor: 3.162

6.  Protein folding: independent unrelated pathways or predetermined pathway with optional errors.

Authors:  Sabrina Bédard; Mallela M G Krishna; Leland Mayne; S Walter Englander
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-14       Impact factor: 11.205

7.  Probing the contribution of internal cavities to the volume change of protein unfolding under pressure.

Authors:  K J Frye; C A Royer
Journal:  Protein Sci       Date:  1998-10       Impact factor: 6.725

8.  Determination of the volume changes for pressure-induced transitions of apomyoglobin between the native, molten globule, and unfolded states.

Authors:  G J Vidugiris; C A Royer
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

9.  Fluorescence characterization of Trp 21 in rat glutathione S-transferase 1-1: microconformational changes induced by S-hexyl glutathione.

Authors:  R W Wang; A W Bird; D J Newton; A Y Lu; W M Atkins
Journal:  Protein Sci       Date:  1993-12       Impact factor: 6.725

10.  The foldon substructure of staphylococcal nuclease.

Authors:  Sabrina Bédard; Leland C Mayne; Ronald W Peterson; A Joshua Wand; S Walter Englander
Journal:  J Mol Biol       Date:  2007-12-15       Impact factor: 5.469

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