Literature DB >> 11274463

Pressure versus temperature unfolding of ribonuclease A: an FTIR spectroscopic characterization of 10 variants at the carboxy-terminal site.

J Torrent1, P Rubens, M Ribó, K Heremans, M Vilanova.   

Abstract

FTIR spectroscopy was used to characterize and compare the temperature- and pressure-induced unfolding of ribonuclease A and a set of its variants engineered in a hydrophobic region of the C-terminal part of the molecule postulated as a CFIS. The results show for all the ribonucleases investigated, a cooperative, two-state, reversible unfolding transition using both pressure and temperature. The relative stabilities, among the different sites and different variants at the same site, monitored either through the changes in the position of the maximum of the amide I' band and the tyrosine band, or the maximum of the band assigned to the beta-sheet structure, corroborate the results of a previous study using fourth-derivative UV absorbance spectroscopy. In addition, variants at position 108 are the most critical for ribonuclease structure and stability. The V108G variant seems to present a greater conformational flexibility than the other variants. The pressure- and temperature-denaturated states of all the ribonucleases characterized retained some secondary structure. However, their spectral maxima were centered at different wavenumbers, which suggests that pressure- and temperature-denaturated states do not have the same structural characteristics. Nevertheless, there was close correlation between the pressure and temperature midpoint transition values for the whole series of protein variants, which indicated a common tendency of stability toward pressure and heat.

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Year:  2001        PMID: 11274463      PMCID: PMC2373970          DOI: 10.1110/ps.43001

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  48 in total

1.  Heat capacity change for ribonuclease A folding.

Authors:  C N Pace; G R Grimsley; S T Thomas; G I Makhatadze
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

2.  Ribonuclease A.

Authors:  Ronald T. Raines
Journal:  Chem Rev       Date:  1998-05-07       Impact factor: 60.622

3.  Denatured states of ribonuclease A have compact dimensions and residual secondary structure.

Authors:  T R Sosnick; J Trewhella
Journal:  Biochemistry       Date:  1992-09-08       Impact factor: 3.162

4.  Probing the contribution of internal cavities to the volume change of protein unfolding under pressure.

Authors:  K J Frye; C A Royer
Journal:  Protein Sci       Date:  1998-10       Impact factor: 6.725

5.  Pressure versus heat-induced unfolding of ribonuclease A: the case of hydrophobic interactions within a chain-folding initiation site.

Authors:  J Torrent; J P Connelly; M G Coll; M Ribó; R Lange; M Vilanova
Journal:  Biochemistry       Date:  1999-11-30       Impact factor: 3.162

6.  Pressure- and thermally-induced reversible changes in the secondary structure of ribonuclease A studied by FT-IR spectroscopy.

Authors:  N Takeda; M Kato; Y Taniguchi
Journal:  Biochemistry       Date:  1995-05-02       Impact factor: 3.162

7.  Extreme heat- and pressure-resistant 7-kDa protein P2 from the archaeon Sulfolobus solfataricus is dramatically destabilized by a single-point amino acid substitution.

Authors:  P Fusi; K Goossens; R Consonni; M Grisa; P Puricelli; G Vecchio; M Vanoni; L Zetta; K Heremans; P Tortora
Journal:  Proteins       Date:  1997-11

8.  Valine 108, a chain-folding initiation site-belonging residue, crucial for the ribonuclease A stability.

Authors:  M G Coll; I I Protasevich; J Torrent; M Ribó; V M Lobachov; A A Makarov; M Vilanova
Journal:  Biochem Biophys Res Commun       Date:  1999-11-19       Impact factor: 3.575

9.  Amide H/D exchange in the thermal transition of bovine pancreatic ribonuclease A.

Authors:  S Talluri; H A Scheraga
Journal:  Biochem Biophys Res Commun       Date:  1990-10-30       Impact factor: 3.575

10.  Engineering ribonuclease A: production, purification and characterization of wild-type enzyme and mutants at Gln11.

Authors:  S B delCardayré; M Ribó; E M Yokel; D J Quirk; W J Rutter; R T Raines
Journal:  Protein Eng       Date:  1995-03
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  10 in total

1.  Single-domain antibody fragments with high conformational stability.

Authors:  Mireille Dumoulin; Katja Conrath; Annemie Van Meirhaeghe; Filip Meersman; Karel Heremans; Leon G J Frenken; Serge Muyldermans; Lode Wyns; Andre Matagne
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

2.  Pressure-jump-induced kinetics reveals a hydration dependent folding/unfolding mechanism of ribonuclease A.

Authors:  J Font; J Torrent; M Ribó; D V Laurents; C Balny; M Vilanova; R Lange
Journal:  Biophys J       Date:  2006-06-23       Impact factor: 4.033

3.  The contribution of the residues from the main hydrophobic core of ribonuclease A to its pressure-folding transition state.

Authors:  Josep Font; Antoni Benito; Reinhard Lange; Marc Ribó; Maria Vilanova
Journal:  Protein Sci       Date:  2006-04-05       Impact factor: 6.725

4.  Oligomerization and aggregation of bovine pancreatic ribonuclease A: characteristic events observed by FTIR spectroscopy.

Authors:  Yong-Bin Yan; Jun Zhang; Hua-Wei He; Hai-Meng Zhou
Journal:  Biophys J       Date:  2006-01-13       Impact factor: 4.033

5.  Thermal unfolding of eosinophil cationic protein/ribonuclease 3: a nonreversible process.

Authors:  Zoran Nikolovski; Víctor Buzón; Marc Ribó; Mohammed Moussaoui; Maria Vilanova; Claudi M Cuchillo; Josep Cladera; M Victòria Nogués
Journal:  Protein Sci       Date:  2006-11-06       Impact factor: 6.725

6.  Perturbation of the Conformational Dynamics of an Active-Site Loop Alters Enzyme Activity.

Authors:  Donald Gagné; Rachel L French; Chitra Narayanan; Miljan Simonović; Pratul K Agarwal; Nicolas Doucet
Journal:  Structure       Date:  2015-11-19       Impact factor: 5.006

7.  Sulfate anion stabilization of native ribonuclease A both by anion binding and by the Hofmeister effect.

Authors:  Carlos H I Ramos; Robert L Baldwin
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

8.  Distinct unfolding and refolding pathways of ribonuclease a revealed by heating and cooling temperature jumps.

Authors:  Joan Torrent; Stéphane Marchal; Marc Ribó; Maria Vilanova; Cédric Georges; Yves Dupont; Reinhard Lange
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

9.  Destabilizing mutations alter the hydrogen exchange mechanism in ribonuclease A.

Authors:  Marta Bruix; Marc Ribó; Antoni Benito; Douglas V Laurents; Manuel Rico; Maria Vilanova
Journal:  Biophys J       Date:  2008-01-11       Impact factor: 4.033

Review 10.  Combining High-Pressure Perturbation with NMR Spectroscopy for a Structural and Dynamical Characterization of Protein Folding Pathways.

Authors:  Cécile Dubois; Isaline Herrada; Philippe Barthe; Christian Roumestand
Journal:  Molecules       Date:  2020-11-26       Impact factor: 4.411

  10 in total

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