Literature DB >> 9649407

Determination of the volume changes for pressure-induced transitions of apomyoglobin between the native, molten globule, and unfolded states.

G J Vidugiris1, C A Royer.   

Abstract

The volume change for the transition from the native state of horse heart apomyoglobin to a pressure-induced intermediate with fluorescence properties similar to those of the well-established molten globule or I form was measured to be -70 ml/mol. Complete unfolding of the protein by pressure at pH 4.2 revealed an upper limit for the unfolding of the intermediate of -61 ml/mol. At 0.3 M guanidine hydrochloride, the entire transition from native to molten globule to unfolded state was observed in the available pressure range below 2.5 kbar. The volume change for the N-->I transition is relatively large and does not correlate well with the changes in relative hydration for these transitions derived from measurements of the changes in heat capacity, consistent with the previously observed lack of correlation between the m-value for denaturant-induced transitions and the measured volume change of unfolding for cooperativity mutants of staphylococcal nuclease (Frye et al. 1996. Biochemistry. 35:10234-10239). Our results support the hypothesis that the volume change associated with the hydration of protein surface upon unfolding may involve both positive and negative underlying contributions that effectively cancel, and that the measured volume changes for protein structural transitions arise from another source, perhaps the elimination of void volume due to packing defects in the structured chains.

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Year:  1998        PMID: 9649407      PMCID: PMC1299719          DOI: 10.1016/S0006-3495(98)77534-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  40 in total

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Authors:  M J CRUMPTON; A POLSON
Journal:  J Mol Biol       Date:  1965-04       Impact factor: 5.469

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Journal:  Biochim Biophys Acta       Date:  1959-10

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Journal:  Adv Protein Chem       Date:  1959

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Authors:  E Bismuto; G Irace; I Sirangelo; E Gratton
Journal:  Protein Sci       Date:  1996-01       Impact factor: 6.725

5.  Structural characterization of the pressure-denatured state and unfolding/refolding kinetics of staphylococcal nuclease by synchrotron small-angle X-ray scattering and Fourier-transform infrared spectroscopy.

Authors:  G Panick; R Malessa; R Winter; G Rapp; K J Frye; C A Royer
Journal:  J Mol Biol       Date:  1998-01-16       Impact factor: 5.469

6.  Probing pH and pressure effects on the apomyoglobin heme pocket with the 2'-(N,N-dimethylamino)-6-naphthoyl-4-trans-cyclohexanoic acid fluorophore.

Authors:  O Sire; B Alpert; C A Royer
Journal:  Biophys J       Date:  1996-06       Impact factor: 4.033

7.  Is apomyoglobin a molten globule? Structural characterization by NMR.

Authors:  D Eliezer; P E Wright
Journal:  J Mol Biol       Date:  1996-11-08       Impact factor: 5.469

Review 8.  On volume changes accompanying conformational transitions of biopolymers.

Authors:  T V Chalikian; K J Bresiauer
Journal:  Biopolymers       Date:  1996-11       Impact factor: 2.505

Review 9.  High pressure effects on protein structure and function.

Authors:  V V Mozhaev; K Heremans; J Frank; P Masson; C Balny
Journal:  Proteins       Date:  1996-01

10.  Packing interactions in the apomyglobin folding intermediate.

Authors:  M S Kay; R L Baldwin
Journal:  Nat Struct Biol       Date:  1996-05
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  15 in total

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Authors:  Harald Lesch; Hans Stadlbauer; Josef Friedrich; Jane M Vanderkooi
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

2.  Hydration and protein folding in water and in reverse micelles: compressibility and volume changes.

Authors:  D Valdez; J Y Le Huérou; M Gindre; W Urbach; M Waks
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

3.  Comparative Fourier transform infrared spectroscopy study of cold-, pressure-, and heat-induced unfolding and aggregation of myoglobin.

Authors:  Filip Meersman; László Smeller; Karel Heremans
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

4.  High pressure fosters protein refolding from aggregates at high concentrations.

Authors:  R J St John; J F Carpenter; T W Randolph
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

5.  Structure-function perturbation and dissociation of tetrameric urate oxidase by high hydrostatic pressure.

Authors:  Eric Girard; Stéphane Marchal; Javier Perez; Stéphanie Finet; Richard Kahn; Roger Fourme; Guillaume Marassio; Anne-Claire Dhaussy; Thierry Prangé; Marion Giffard; Fabienne Dulin; Françoise Bonneté; Reinhard Lange; Jacques H Abraini; Mohamed Mezouar; Nathalie Colloc'h
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

6.  Effect of hydrostatic pressure on unfolding of alpha-lactalbumin: volumetric equivalence of the molten globule and unfolded state.

Authors:  Y Kobashigawa; M Sakurai; K Nitta
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

7.  Comparative study on dihydrofolate reductases from Shewanella species living in deep-sea and ambient atmospheric-pressure environments.

Authors:  Chiho Murakami; Eiji Ohmae; Shin-ichi Tate; Kunihiko Gekko; Kaoru Nakasone; Chiaki Kato
Journal:  Extremophiles       Date:  2010-12-23       Impact factor: 2.395

8.  Circular dichroism and site-directed spin labeling reveal structural and dynamical features of high-pressure states of myoglobin.

Authors:  Michael T Lerch; Joseph Horwitz; John McCoy; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

9.  Hydrated and dehydrated tertiary interactions--opening and closing--of a four-helix bundle peptide.

Authors:  Martin Lignell; Lotta T Tegler; Hans-Christian Becker
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

10.  Volume of Hsp90 ligand binding and the unfolding phase diagram as a function of pressure and temperature.

Authors:  Vytautas Petrauskas; Joana Gylytė; Zigmantas Toleikis; Piotras Cimmperman; Daumantas Matulis
Journal:  Eur Biophys J       Date:  2013-01-05       Impact factor: 1.733

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