Literature DB >> 8490131

Enigmatic double-stranded RNA in Japonica rice.

T Fukuhara1, H Moriyama, J Y Pak, H Hyakutake, T Nitta.   

Abstract

We have found a linear, 16 kb, double-stranded RNA (dsRNA) in symptomless Japonica rice (Oryza sativa L.) that is not found in Indica rice (Oryza sativa L.). The dsRNA was detected in every tissue and at every developmental stage, and its copy number was approximately constant (about 20 copies/cell). Double-stranded RNA was also detected in two strains of Oryza rufipogon (an ancestor of O. sativa). Hybridization experiments indicated that the dsRNA of O. rufipogon was homologous but not identical to that of O. sativa. The sequence of about 13.2 kb of the dsRNA was determined and two open reading frames (ORFs) were found. The larger ORF (ORF B) was more than 12,351 nucleotides long and encoded more than 4,117 amino acid residues.

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Year:  1993        PMID： 8490131     DOI： 10.1007/bf00023608

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN： 0167-4412            Impact factor:   4.076


  17 in total

1.  Partial nucleotide sequence from enigmatic dsRNAs in Phaseolus vulgaris.

Authors:  D A Wakarchuk; R I Hamilton
Journal:  Plant Mol Biol       Date:  1990-04       Impact factor: 4.076

2.  Inheritance of large mitochondrial RNA's in alfalfa.

Authors:  D J Fairbanks; S E Smith; J K Brown
Journal:  Theor Appl Genet       Date:  1988-10       Impact factor: 5.699

3.  Association of particles that contain double-stranded RNAs with algal chloroplasts and mitochondria.

Authors:  J Ishihara; J Y Pak; T Fukuhara; T Nitta
Journal:  Planta       Date:  1992-07       Impact factor: 4.116

4.  Identification and characterization of double-stranded RNA associated with cytoplasmic male sterility in Vicia faba.

Authors:  L K Grill; S J Garger
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

5.  Distribution and organization of a tandemly repeated 352-bp sequence in the oryzae family.

Authors:  A De Kochko; M C Kiefer; F Cordesse; A S Reddy; M Delseny
Journal:  Theor Appl Genet       Date:  1991-07       Impact factor: 5.699

6.  Distribution of mitochondrial plasmid-like DNA in cultivated rice (Oryza sativa L.) and its relationship with varietal groups.

Authors:  K Kadowaki; K Yazaki; T Osumi; K Harada; M Katsuta; M Nakagahra
Journal:  Theor Appl Genet       Date:  1988-12       Impact factor: 5.699

7.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

8.  Ribosomal gene spacer length variability in cultivated and wild rice species.

Authors:  F Cordesse; G Second; M Delseny
Journal:  Theor Appl Genet       Date:  1990-01       Impact factor: 5.699

9.  The double-stranded RNA genome of yeast virus L-A encodes its own putative RNA polymerase by fusing two open reading frames.

Authors:  T Icho; R B Wickner
Journal:  J Biol Chem       Date:  1989-04-25       Impact factor: 5.157

10.  Virus-like genetic organization and expression strategy for a double-stranded RNA genetic element associated with biological control of chestnut blight.

Authors:  R Shapira; G H Choi; D L Nuss
Journal:  EMBO J       Date:  1991-04       Impact factor: 11.598
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  9 in total

1.  Molecular characterization of a single mitochondria-associated double-stranded RNA in the green alga Bryopsis.

Authors:  R Koga; T Fukuhara; T Nitta
Journal:  Plant Mol Biol       Date:  1998-03       Impact factor: 4.076

2.  Stringently and developmentally regulated levels of a cytoplasmic double-stranded RNA and its high-efficiency transmission via egg and pollen in rice.

Authors:  H Moriyama; K Kanaya; J Z Wang; T Nitta; T Fukuhara
Journal:  Plant Mol Biol       Date:  1996-07       Impact factor: 4.076

3.  Double-stranded RNA in rice: a novel RNA replicon in plants.

Authors:  H Moriyama; T Nitta; T Fukuhara
Journal:  Mol Gen Genet       Date:  1995-08-21

4.  Unusual inheritance of evolutionarily-related double-stranded RNAs in interspecific hybrid between rice plants Oryza sativa and Oryza rufipogon.

Authors:  H Moriyama; H Horiuchi; T Nitta; T Fukuhara
Journal:  Plant Mol Biol       Date:  1999-04       Impact factor: 4.076

5.  Putative replication intermediates in endornavirus, a novel genus of plant dsRNA viruses.

Authors:  Hideki Horiuchi; Toshiyuki Fukuhara
Journal:  Virus Genes       Date:  2004-12       Impact factor: 2.332

6.  Complete nucleotide sequence and genome organization of an endornavirus from bottle gourd (Lagenaria siceraria) in California, U.S.A.

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Journal:  Virus Genes       Date:  2014-05-13       Impact factor: 2.332

7.  Evolution of and horizontal gene transfer in the Endornavirus genus.

Authors:  Dami Song; Won Kyong Cho; Sang-Ho Park; Yeonhwa Jo; Kook-Hyung Kim
Journal:  PLoS One       Date:  2013-05-07       Impact factor: 3.240

8.  Ultrastructural Analysis of Cells From Bell Pepper (Capsicum annuum) Infected With Bell Pepper Endornavirus.

Authors:  Katarzyna Otulak-Kozieł; Edmund Kozieł; Cesar Escalante; Rodrigo A Valverde
Journal:  Front Plant Sci       Date:  2020-04-28       Impact factor: 5.753

9.  Genome Characterization and Phylogenetic Analysis of a Novel Endornavirus That Infects Fungal Pathogen Sclerotinia sclerotiorum.

Authors:  Xin Luo; Daohong Jiang; Jiatao Xie; Jichun Jia; Jie Duan; Jiasen Cheng; Yanping Fu; Tao Chen; Xiao Yu; Bo Li; Yang Lin
Journal:  Viruses       Date:  2022-02-23       Impact factor: 5.048
  9 in total

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