Literature DB >> 8469972

Electrostatic screening of charge and dipole interactions with the helix backbone.

D J Lockhart1, P S Kim.   

Abstract

Electrostatic interactions in proteins are potentially quite strong, but these interactions are mitigated by the screening effects of water, ions, and nearby protein atoms. The early work of Kirkwood and Westheimer on small organic molecules showed that the extent of the screening may depend on whether charged or dipolar groups are involved. The dielectric and ionic screening of the interactions between the dipolar backbone amide groups of monomeric alpha helices and either (i) solvent-exposed charges or (ii) solvent-exposed dipoles at the amino terminus was measured. The dielectric screening effects are an order of magnitude greater for the backbone-charge interactions than for the backbone-dipole interactions, and the ionic strength dependence is substantially different in the two cases. These results suggest that interactions that involve the dipolar groups of proteins may be relatively more important for stability and function than is generally thought.

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Year:  1993        PMID: 8469972     DOI: 10.1126/science.8469972

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  32 in total

1.  Structure of a protein G helix variant suggests the importance of helix propensity and helix dipole interactions in protein design.

Authors:  P Strop; A M Marinescu; S L Mayo
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

2.  Vibrational coupling, isotopic editing, and beta-sheet structure in a membrane-bound polypeptide.

Authors:  Cynthia Paul; Jianping Wang; William C Wimley; Robin M Hochstrasser; Paul H Axelsen
Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

3.  Simulation of the folding equilibrium of alpha-helical peptides: a comparison of the generalized Born approximation with explicit solvent.

Authors:  Hugh Nymeyer; Angel E García
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-14       Impact factor: 11.205

4.  Sodium perchlorate effects on the helical stability of a mainly alanine peptide.

Authors:  Eliana K Asciutto; Ignacio J General; Kan Xiong; Kang Xiong; Sanford A Asher; Jeffry D Madura
Journal:  Biophys J       Date:  2010-01-20       Impact factor: 4.033

5.  beta-Peptides as inhibitors of protein-protein interactions.

Authors:  Joshua A Kritzer; Olen M Stephens; Danielle A Guarracino; Samuel K Reznik; Alanna Schepartz
Journal:  Bioorg Med Chem       Date:  2005-01-03       Impact factor: 3.641

6.  Folding thermodynamics of peptides.

Authors:  Anders Irbäck; Sandipan Mohanty
Journal:  Biophys J       Date:  2004-12-21       Impact factor: 4.033

7.  Exploring the helix-coil transition via all-atom equilibrium ensemble simulations.

Authors:  Eric J Sorin; Vijay S Pande
Journal:  Biophys J       Date:  2005-01-21       Impact factor: 4.033

8.  Mechanisms of tryptophan fluorescence shifts in proteins.

Authors:  J T Vivian; P R Callis
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

9.  Do ligand binding and solvent exclusion alter the electrostatic character within the oxyanion hole of an enzymatic active site?

Authors:  Paul A Sigala; Aaron T Fafarman; Patrick E Bogard; Steven G Boxer; Daniel Herschlag
Journal:  J Am Chem Soc       Date:  2007-09-14       Impact factor: 15.419

10.  Charge selectivity of the designed uncharged peptide ion channel Ac-(LSSLLSL)3-CONH2.

Authors:  P K Kienker; J D Lear
Journal:  Biophys J       Date:  1995-04       Impact factor: 4.033

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