Literature DB >> 8464870

Bradyrhizobium japonicum rhizobitoxine genes and putative enzyme functions: expression requires a translational frameshift.

X Ruan1, C Zhang, N K Peters.   

Abstract

Some strains of Bradyrhizobium japonicum produce rhizobitoxine, a phytotoxin that causes foliar chlorosis on susceptible host plants. We have previously obtained Tn5-induced rhizobitoxine null mutants of B. japonicum. DNA sequence analysis of the region surrounding two Tn5 insertions identifies two overlapping open reading frames. The first open reading frame (rtxA) predicts a 54-kDa protein for which the N-terminal 280 residues have sequence similarity to serine: pyruvate aminotransferase. The sequence homology to aminotransferase is consistent with the involvement of this gene in serinol production, a likely intermediate in rhizobitoxine biosynthesis. Previously, a mutant in this open reading frame was shown not to make serinol. The predicted amino acid sequence of the second open reading frame (rtxB) has similarity to yeast O-acetylhomoserine sulfhydrolase. This enzyme function is similar to that required for dihydrorhizobitoxine synthase. The DNA sequence shows that the rtxB open reading frame overlaps rtxA, suggesting that expression of rtxB requires a -1 translational frameshift. Protein expression experiments demonstrate production of an RtxAB fusion protein. The ability of the overlapping rtxA and rtxB sequences to promote a translational frameshift was confirmed in a heterologous expression system. In Escherichia coli, this frameshift appears to be unusually efficient, occurring at a frequency of 80-90%.

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Year:  1993        PMID: 8464870      PMCID: PMC46151          DOI: 10.1073/pnas.90.7.2641

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

2.  A plant flavone, luteolin, induces expression of Rhizobium meliloti nodulation genes.

Authors:  N K Peters; J W Frost; S R Long
Journal:  Science       Date:  1986-08-29       Impact factor: 47.728

3.  Serinol phosphate as an intermediate in serinol formation in sugarcane.

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Journal:  Plant Physiol       Date:  1978-01       Impact factor: 8.340

4.  Symbiotic host-specificity of Rhizobium meliloti is determined by a sulphated and acylated glucosamine oligosaccharide signal.

Authors:  P Lerouge; P Roche; C Faucher; F Maillet; G Truchet; J C Promé; J Dénarié
Journal:  Nature       Date:  1990-04-19       Impact factor: 49.962

5.  Human immunodeficiency virus type 1 gag-pol frameshifting is dependent on downstream mRNA secondary structure: demonstration by expression in vivo.

Authors:  N T Parkin; M Chamorro; H E Varmus
Journal:  J Virol       Date:  1992-08       Impact factor: 5.103

6.  Rapid and sensitive assay for the phytotoxin rhizobitoxine.

Authors:  X Ruan; N K Peters
Journal:  Appl Environ Microbiol       Date:  1991-07       Impact factor: 4.792

7.  Broad host range DNA cloning system for gram-negative bacteria: construction of a gene bank of Rhizobium meliloti.

Authors:  G Ditta; S Stanfield; D Corbin; D R Helinski
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

8.  Isolation and characterization of rhizobitoxine mutants of Bradyrhizobium japonicum.

Authors:  X Ruan; N K Peters
Journal:  J Bacteriol       Date:  1992-06       Impact factor: 3.490

9.  Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region.

Authors:  T Jacks; H D Madhani; F R Masiarz; H E Varmus
Journal:  Cell       Date:  1988-11-04       Impact factor: 41.582

Review 10.  Ribosome gymnastics--degree of difficulty 9.5, style 10.0.

Authors:  J F Atkins; R B Weiss; R F Gesteland
Journal:  Cell       Date:  1990-08-10       Impact factor: 41.582

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  8 in total

1.  DNA sequence and mutational analysis of rhizobitoxine biosynthesis genes in Bradyrhizobium elkanii.

Authors:  T Yasuta; S Okazaki; H Mitsui; K Yuhashi; H Ezura; K Minamisawa
Journal:  Appl Environ Microbiol       Date:  2001-11       Impact factor: 4.792

2.  Rhizobitoxine production by Bradyrhizobium elkanii enhances nodulation and competitiveness on Macroptilium atropurpureum.

Authors:  K Yuhashi; N Ichikawa; H Ezura; S Akao; Y Minakawa; N Nukui; T Yasuta; K Minamisawa
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

3.  Potential symbiosis-specific genes uncovered by sequencing a 410-kilobase DNA region of the Bradyrhizobium japonicum chromosome.

Authors:  M Göttfert; S Röthlisberger; C Kündig; C Beck; R Marty; H Hennecke
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

4.  Bradyrhizobium elkanii rtxC gene is required for expression of symbiotic phenotypes in the final step of rhizobitoxine biosynthesis.

Authors:  Shin Okazaki; Masayuki Sugawara; Kiwamu Minamisawa
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

5.  New assay for rhizobitoxine based on inhibition of 1-aminocyclopropane-1-carboxylate synthase.

Authors:  T Yasuta; S Satoh; K Minamisawa
Journal:  Appl Environ Microbiol       Date:  1999-02       Impact factor: 4.792

6.  Serinol: small molecule - big impact.

Authors:  Björn Andreeßen; Alexander Steinbüchel
Journal:  AMB Express       Date:  2011-06-13       Impact factor: 3.298

7.  Genomic characterization of Sinorhizobium meliloti AK21, a wild isolate from the Aral Sea Region.

Authors:  María Dolores Molina-Sánchez; José Antonio López-Contreras; Nicolás Toro; Manuel Fernández-López
Journal:  Springerplus       Date:  2015-06-16

8.  Comparative conventional and phenomics approaches to assess symbiotic effectiveness of Bradyrhizobia strains in soybean (Glycine max L. Merrill) to drought.

Authors:  Venkadasamy Govindasamy; Priya George; Lalitkumar Aher; Shunmugiah V Ramesh; Arunachalam Thangasamy; Sivalingam Anandan; Susheel Kumar Raina; Mahesh Kumar; Jagadish Rane; Kannepalli Annapurna; Paramjit Singh Minhas
Journal:  Sci Rep       Date:  2017-07-31       Impact factor: 4.379

  8 in total

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