Literature DB >> 2846182

Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region.

T Jacks1, H D Madhani, F R Masiarz, H E Varmus.   

Abstract

The gag-pol protein of Rous sarcoma virus (RSV), the precursor to the enzymes responsible for reverse transcription and integration, is expressed from two genes that lie in different translational reading frames by ribosomal frameshifting. Here, we localize the site of frameshifting and show that the frameshifting reaction is mediated by slippage of two adjacent tRNAs by a single nucleotide in the 5' direction. The gag terminator, which immediately follows the frameshift site, is not required for frameshifting. Other suspected retroviral frameshift sites mediate frameshifting when placed at the end of RSV gag. Mutations in RSV pol also affect synthesis of the gag-pol protein in vitro. The effects of these mutations best correlate with the potential to form an RNA stem-loop structure adjacent to the frameshift site. A short sequence of RSV RNA, 147 nucleotides in length, containing the frameshift site and stem-loop structure, is sufficient to direct frameshifting in a novel genetic context.

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Year:  1988        PMID: 2846182      PMCID: PMC7133365          DOI: 10.1016/0092-8674(88)90031-1

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  51 in total

1.  Complete nucleotide sequence of an infectious clone of human T-cell leukemia virus type II: an open reading frame for the protease gene.

Authors:  K Shimotohno; Y Takahashi; N Shimizu; T Gojobori; D W Golde; I S Chen; M Miwa; T Sugimura
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

2.  The gag and pol genes of bovine leukemia virus: nucleotide sequence and analysis.

Authors:  N R Rice; R M Stephens; A Burny; R V Gilden
Journal:  Virology       Date:  1985-04-30       Impact factor: 3.616

Review 3.  An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs.

Authors:  M Kozak
Journal:  Nucleic Acids Res       Date:  1987-10-26       Impact factor: 16.971

4.  Identification of the coding sequence for a reverse transcriptase-like enzyme in a transposable genetic element in Drosophila melanogaster.

Authors:  K Saigo; W Kugimiya; Y Matsuo; S Inouye; K Yoshioka; S Yuki
Journal:  Nature       Date:  1984 Dec 13-19       Impact factor: 49.962

5.  Leaky UAG termination codon in tobacco mosaic virus RNA.

Authors:  H R Pelham
Journal:  Nature       Date:  1978-03-30       Impact factor: 49.962

6.  Nucleotide sequence of SRV-1, a type D simian acquired immune deficiency syndrome retrovirus.

Authors:  M D Power; P A Marx; M L Bryant; M B Gardner; P J Barr; P A Luciw
Journal:  Science       Date:  1986-03-28       Impact factor: 47.728

7.  Murine leukemia virus protease is encoded by the gag-pol gene and is synthesized through suppression of an amber termination codon.

Authors:  Y Yoshinaka; I Katoh; T D Copeland; S Oroszlan
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

8.  Sequence of simian immunodeficiency virus from macaque and its relationship to other human and simian retroviruses.

Authors:  L Chakrabarti; M Guyader; M Alizon; M D Daniel; R C Desrosiers; P Tiollais; P Sonigo
Journal:  Nature       Date:  1987 Aug 6-12       Impact factor: 49.962

9.  Nucleotide sequence of a complete mouse intracisternal A-particle genome: relationship to known aspects of particle assembly and function.

Authors:  J A Mietz; Z Grossman; K K Lueders; E L Kuff
Journal:  J Virol       Date:  1987-10       Impact factor: 6.549

10.  An efficient ribosomal frame-shifting signal in the polymerase-encoding region of the coronavirus IBV.

Authors:  I Brierley; M E Boursnell; M M Binns; B Bilimoria; V C Blok; T D Brown; S C Inglis
Journal:  EMBO J       Date:  1987-12-01       Impact factor: 11.598

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  312 in total

1.  Programmed ribosomal frameshifting: much ado about knotting!

Authors:  S L Alam; J F Atkins; R F Gesteland
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

2.  Specific mutations in a viral RNA pseudoknot drastically change ribosomal frameshifting efficiency.

Authors:  Y G Kim; L Su; S Maas; A O'Neill; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

Review 3.  Translational control of viral gene expression in eukaryotes.

Authors:  M Gale; S L Tan; M G Katze
Journal:  Microbiol Mol Biol Rev       Date:  2000-06       Impact factor: 11.056

4.  More surprises in translation: initiation without the initiator tRNA.

Authors:  U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

5.  Kinetics of ribosomal pausing during programmed -1 translational frameshifting.

Authors:  J D Lopinski; J D Dinman; J A Bruenn
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

6.  The frameshift signal of HIV-1 involves a potential intramolecular triplex RNA structure.

Authors:  Jonathan D Dinman; Sara Richter; Ewan P Plant; Ronald C Taylor; Amy B Hammell; Tariq M Rana
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

7.  Decoding of tandem quadruplets by adjacent tRNAs with eight-base anticodon loops.

Authors:  B Moore; C C Nelson; B C Persson; R F Gesteland; J F Atkins
Journal:  Nucleic Acids Res       Date:  2000-09-15       Impact factor: 16.971

8.  Creation and expression of myristylated forms of Rous sarcoma virus gag protein in mammalian cells.

Authors:  J W Wills; R C Craven; J A Achacoso
Journal:  J Virol       Date:  1989-10       Impact factor: 5.103

9.  Characterization of the expression, intracellular localization, and replication complex association of the putative mouse hepatitis virus RNA-dependent RNA polymerase.

Authors:  Sarah M Brockway; Corrie T Clay; Xiao Tao Lu; Mark R Denison
Journal:  J Virol       Date:  2003-10       Impact factor: 5.103

10.  Special peptidyl-tRNA molecules can promote translational frameshifting without slippage.

Authors:  A Vimaladithan; P J Farabaugh
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

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