Literature DB >> 8422981

Each hypersensitive site of the human beta-globin locus control region confers a different developmental pattern of expression on the globin genes.

P Fraser1, S Pruzina, M Antoniou, F Grosveld.   

Abstract

We have tested the effect of the individual DNase I hypersensitive site (HS) regions of the globin locus control region (LCR) on the developmental expression pattern of the human gamma and beta genes in transgenic mice. The results show that HS3 is the most active site during the embryonic period. It is also the only site capable of high level expression of the gamma genes during fetal hematopoiesis, in a population of cells that are capable of expressing both the gamma and beta genes. Region HS4 shows the highest activity during the adult stage and expresses the gamma genes only at low levels during the embryonic period. HS2 drives equivalent levels of gamma or beta transgene expression throughout development. HS1 has a similar pattern to HS2, although the activity of HS1 is very low. From these results we conclude that the HS regions have distinct developmental specificities and suggest that in the complete LCR they interact with each other to form a larger complex which, in turn, interacts with the globin genes.

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Year:  1993        PMID: 8422981     DOI: 10.1101/gad.7.1.106

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  80 in total

1.  Structural and functional cross-talk between a distant enhancer and the epsilon-globin gene promoter shows interdependence of the two elements in chromatin.

Authors:  J C McDowell; A Dean
Journal:  Mol Cell Biol       Date:  1999-11       Impact factor: 4.272

2.  Targeting a SWI/SNF-related chromatin remodeling complex to the beta-globin promoter in erythroid cells.

Authors:  C H Lee; M R Murphy; J S Lee; J H Chung
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

3.  Inefficient processing impairs release of RNA from the site of transcription.

Authors:  N Custódio; M Carmo-Fonseca; F Geraghty; H S Pereira; F Grosveld; M Antoniou
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

4.  Evaluation of optimal expression cassette in retrovirus vector for beta-thalassemia gene therapy.

Authors:  Wen-Ji Dong; Bin Li; De-Pei Liu; Zhen-Xiang Zu; Jia Li; De-Long Hao; Guang Liu; Zhi-Chen Guo; Chih-Chuan Liang
Journal:  Mol Biotechnol       Date:  2003-06       Impact factor: 2.695

5.  Multiple interactions between regulatory regions are required to stabilize an active chromatin hub.

Authors:  George P Patrinos; Mariken de Krom; Ernie de Boer; An Langeveld; A M Ali Imam; John Strouboulis; Wouter de Laat; Frank G Grosveld
Journal:  Genes Dev       Date:  2004-06-15       Impact factor: 11.361

6.  PRMT5-mediated methylation of histone H4R3 recruits DNMT3A, coupling histone and DNA methylation in gene silencing.

Authors:  Quan Zhao; Gerhard Rank; Yuen T Tan; Haitao Li; Robert L Moritz; Richard J Simpson; Loretta Cerruti; David J Curtis; Dinshaw J Patel; C David Allis; John M Cunningham; Stephen M Jane
Journal:  Nat Struct Mol Biol       Date:  2009-02-22       Impact factor: 15.369

7.  Recombination and transcription of the endogenous Ig heavy chain locus is effected by the Ig heavy chain intronic enhancer core region in the absence of the matrix attachment regions.

Authors:  E Sakai; A Bottaro; L Davidson; B P Sleckman; F W Alt
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-16       Impact factor: 11.205

8.  Cloning and functional characterization of LCR-F1: a bZIP transcription factor that activates erythroid-specific, human globin gene expression.

Authors:  J J Caterina; D Donze; C W Sun; D J Ciavatta; T M Townes
Journal:  Nucleic Acids Res       Date:  1994-06-25       Impact factor: 16.971

Review 9.  Using the ENCODE Resource for Functional Annotation of Genetic Variants.

Authors:  Michael J Pazin
Journal:  Cold Spring Harb Protoc       Date:  2015-03-11

10.  NF-E2 disrupts chromatin structure at human beta-globin locus control region hypersensitive site 2 in vitro.

Authors:  J A Armstrong; B M Emerson
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

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