Literature DB >> 10523648

Structural and functional cross-talk between a distant enhancer and the epsilon-globin gene promoter shows interdependence of the two elements in chromatin.

J C McDowell1, A Dean.   

Abstract

We investigated the requirements for enhancer-promoter communication by using the human beta-globin locus control region (LCR) DNase I-hypersensitive site 2 (HS2) enhancer and the epsilon-globin gene in chromatinized minichromosomes in erythroid cells. Activation of globin genes during development is accompanied by localized alterations of chromatin structure, and CACCC binding factors and GATA-1, which interact with both globin promoters and the LCR, are believed to be critical for globin gene transcription activation. We found that an HS2 element mutated in its GATA motif failed to remodel the epsilon-globin promoter or activate transcription yet HS2 nuclease accessibility did not change. Accessibility and transcription were reduced at promoters with mutated GATA-1 or CACCC sites. Strikingly, these mutations also resulted in reduced accessibility at HS2. In the absence of a globin gene, HS2 is similarly resistant to nuclease digestion. In contrast to observations in Saccharomyces cerevisiae, HS2-dependent promoter remodeling was diminished when we mutated the TATA box, crippling transcription. This mutation also reduced HS2 accessibility. The results indicate that the epsilon-globin promoter and HS2 interact both structurally and functionally and that both upstream activators and the basal transcription apparatus contribute to the interaction. Further, at least in this instance, transcription activation and promoter remodeling by a distant enhancer are not separable.

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Year:  1999        PMID: 10523648      PMCID: PMC84785          DOI: 10.1128/MCB.19.11.7600

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  63 in total

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Journal:  Cell       Date:  1987-11-20       Impact factor: 41.582

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Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-01       Impact factor: 11.205

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Journal:  Mol Cell Biol       Date:  1991-03       Impact factor: 4.272

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Journal:  Cell       Date:  1989-09-08       Impact factor: 41.582

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Journal:  EMBO J       Date:  1990-07       Impact factor: 11.598

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  11 in total

1.  Acetylation of a specific promoter nucleosome accompanies activation of the epsilon-globin gene by beta-globin locus control region HS2.

Authors:  C Y Gui; A Dean
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  Role of NF-Y in in vivo regulation of the gamma-globin gene.

Authors:  Z Duan; G Stamatoyannopoulos; Q Li
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

3.  Recruitment of transcription complexes to the beta-globin gene locus in vivo and in vitro.

Authors:  Karen F Vieira; Padraic P Levings; Meredith A Hill; Valerie J Crusselle; Sung-Hae Lee Kang; James Douglas Engel; Jörg Bungert
Journal:  J Biol Chem       Date:  2004-09-22       Impact factor: 5.157

4.  Beta-globin intergenic transcription and histone acetylation dependent on an enhancer.

Authors:  Aeri Kim; Hui Zhao; Ina Ifrim; Ann Dean
Journal:  Mol Cell Biol       Date:  2007-02-05       Impact factor: 4.272

5.  Beta-globin locus control region HS2 and HS3 interact structurally and functionally.

Authors:  David A Jackson; Jennifer C McDowell; Ann Dean
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

6.  Bystander gene activation by a locus control region.

Authors:  Isabela Cajiao; Aiwen Zhang; Eung Jae Yoo; Nancy E Cooke; Stephen A Liebhaber
Journal:  EMBO J       Date:  2004-09-09       Impact factor: 11.598

7.  A major role for the TATA box in recruitment of chromatin modifying complexes to a globin gene promoter.

Authors:  Chang-Yun Gui; Ann Dean
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-28       Impact factor: 11.205

8.  An insulator blocks spreading of histone acetylation and interferes with RNA polymerase II transfer between an enhancer and gene.

Authors:  Hui Zhao; Ann Dean
Journal:  Nucleic Acids Res       Date:  2004-09-15       Impact factor: 16.971

9.  The role of transcriptional activator GATA-1 at human beta-globin HS2.

Authors:  Youngran Cho; Sang-Hyun Song; Jong Joo Lee; Narae Choi; Chul Geun Kim; Ann Dean; AeRi Kim
Journal:  Nucleic Acids Res       Date:  2008-06-27       Impact factor: 16.971

10.  Nucleosome and transcription activator antagonism at human beta-globin locus control region DNase I hypersensitive sites.

Authors:  AeRi Kim; Sang-hyun Song; Marjorie Brand; Ann Dean
Journal:  Nucleic Acids Res       Date:  2007-08-24       Impact factor: 16.971

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