Literature DB >> 8405383

The KH domain occurs in a diverse set of RNA-binding proteins that include the antiterminator NusA and is probably involved in binding to nucleic acid.

T J Gibson1, J D Thompson, J Heringa.   

Abstract

New findings are presented for the approximately 50 residue KH motif, a domain recently discovered in RNA-binding proteins. The conserved sequence is approximately 10 residues larger than previously reported. Profile searches have revealed new members of this family, including two, E. coli NusA and human GAP-associated p62 phosphoprotein, for which RNA-binding data exists. A nusA homolog was detected in the RNA polymerase gene complex of six archaebacterial species and may encode an antiterminator. All KH-containing proteins are linked with RNA and the KH motif most probably functions as a nucleic acid binding domain.

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Year:  1993        PMID: 8405383     DOI: 10.1016/0014-5793(93)80152-k

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  66 in total

1.  A role for the GSG domain in localizing Sam68 to novel nuclear structures in cancer cell lines.

Authors:  T Chen; F M Boisvert; D P Bazett-Jones; S Richard
Journal:  Mol Biol Cell       Date:  1999-09       Impact factor: 4.138

2.  Comparative genomics and evolution of proteins involved in RNA metabolism.

Authors:  Vivek Anantharaman; Eugene V Koonin; L Aravind
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

3.  Characterization of mutations in the metY-nusA-infB operon that suppress the slow growth of a DeltarimM mutant.

Authors:  G O Bylund; J M Lövgren; P M Wikström
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

4.  The role of a clinically important mutation in the fold and RNA-binding properties of KH motifs.

Authors:  Andres Ramos; David Hollingworth; Annalisa Pastore
Journal:  RNA       Date:  2003-03       Impact factor: 4.942

5.  A novel function for Sam68: enhancement of HIV-1 RNA 3' end processing.

Authors:  Meredith McLaren; Kengo Asai; Alan Cochrane
Journal:  RNA       Date:  2004-07       Impact factor: 4.942

6.  Dim2p, a KH-domain protein required for small ribosomal subunit synthesis.

Authors:  Emmanuel Vanrobays; Jean-Paul Gélugne; Michèle Caizergues-Ferrer; Denis L J Lafontaine
Journal:  RNA       Date:  2004-04       Impact factor: 4.942

Review 7.  RNA remodeling and gene regulation by cold shock proteins.

Authors:  Sangita Phadtare; Konstantin Severinov
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

8.  The PRC-barrel domain of the ribosome maturation protein RimM mediates binding to ribosomal protein S19 in the 30S ribosomal subunits.

Authors:  J Mattias Lövgren; Göran O Bylund; Manoj K Srivastava; L A Carina Lundberg; Olof P Persson; Gunnar Wingsle; P Mikael Wikström
Journal:  RNA       Date:  2004-11       Impact factor: 4.942

9.  Effect of in vitro promoter methylation and CGG repeat expansion on FMR-1 expression.

Authors:  G Sandberg; M Schalling
Journal:  Nucleic Acids Res       Date:  1997-07-15       Impact factor: 16.971

10.  The KH domain of the branchpoint sequence binding protein determines specificity for the pre-mRNA branchpoint sequence.

Authors:  J A Berglund; M L Fleming; M Rosbash
Journal:  RNA       Date:  1998-08       Impact factor: 4.942

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