Literature DB >> 8376347

The Escherichia coli DNA polymerase III holoenzyme contains both products of the dnaX gene, tau and gamma, but only tau is essential.

A Blinkova1, C Hervas, P T Stukenberg, R Onrust, M E O'Donnell, J R Walker.   

Abstract

The replicative polymerase of Escherichia coli, DNA polymerase III, consists of a three-subunit core polymerase plus seven accessory subunits. Of these seven, tau and gamma are products of one replication gene, dnaX. The shorter gamma is created from within the tau reading frame by a programmed ribosomal -1 frameshift over codons 428 and 429 followed by a stop codon in the new frame. Two temperature-sensitive mutations are available in dnaX. The 2016(Ts) mutation altered both tau and gamma by changing codon 118 from glycine to aspartate; the 36(Ts) mutation affected the activity only of tau because it altered codon 601 (from glutamate to lysine). Evidence which indicates that, of these two proteins, only the longer tau is essential includes the following. (i) The 36(Ts) mutation is a temperature-sensitive lethal allele, and overproduction of wild-type gamma cannot restore its growth. (ii) An allele which produced tau only could be substituted for the wild-type chromosomal gene, but a gamma-only allele could not substitute for the wild-type dnaX in the haploid state. Thus, the shorter subunit gamma is not essential, suggesting that tau can be substitute for the usual function(s) of gamma. Consistent with these results, we found that a functional polymerase was assembled from nine pure subunits in the absence of the gamma subunit. However, the possibility that, in cells growing without gamma, proteolysis of tau to form a gamma-like product in amounts below the Western blot (immunoblot) sensitivity level cannot be excluded.

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Year:  1993        PMID: 8376347      PMCID: PMC206684          DOI: 10.1128/jb.175.18.6018-6027.1993

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  58 in total

1.  Escherichia coli DnaX product, the tau subunit of DNA polymerase III, is a multifunctional protein with single-stranded DNA-dependent ATPase activity.

Authors:  S H Lee; J R Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

2.  Monoclonal antibodies specific for the tau subunit of the DNA polymerase III holoenzyme of Escherichia coli. Use to demonstrate that tau is the product of the dnaZX gene and that both it and gamma, the dnaZ gene product, are integral components of the same enzyme assembly.

Authors:  J R Hawker; C S McHenry
Journal:  J Biol Chem       Date:  1987-09-15       Impact factor: 5.157

3.  Accessory proteins bind a primed template and mediate rapid cycling of DNA polymerase III holoenzyme from Escherichia coli.

Authors:  M E O'Donnell
Journal:  J Biol Chem       Date:  1987-12-05       Impact factor: 5.157

4.  Relation of the Escherichia coli dnaX gene to its two products--the tau and gamma subunits of DNA polymerase III holoenzyme.

Authors:  S H Lee; P Kanda; R C Kennedy; J R Walker
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

5.  DNA polymerase III holoenzyme of Escherichia coli. III. Distinctive processive polymerases reconstituted from purified subunits.

Authors:  S Maki; A Kornberg
Journal:  J Biol Chem       Date:  1988-05-15       Impact factor: 5.157

6.  DNA polymerase III holoenzyme of Escherichia coli. I. Purification and distinctive functions of subunits tau and gamma, the dnaZX gene products.

Authors:  S Maki; A Kornberg
Journal:  J Biol Chem       Date:  1988-05-15       Impact factor: 5.157

7.  DNA polymerase III holoenzyme of Escherichia coli. II. A novel complex including the gamma subunit essential for processive synthesis.

Authors:  S Maki; A Kornberg
Journal:  J Biol Chem       Date:  1988-05-15       Impact factor: 5.157

8.  "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A.

Authors:  W N Burnette
Journal:  Anal Biochem       Date:  1981-04       Impact factor: 3.365

9.  The dnaZ protein, the gamma subunit of DNA polymerase III holoenzyme of Escherichia coli.

Authors:  U Hübscher; A Kornberg
Journal:  J Biol Chem       Date:  1980-12-25       Impact factor: 5.157

10.  Nucleoside triphosphate binding to DNA polymerase III holoenzyme of Escherichia coli. A direct photoaffinity labeling study.

Authors:  S B Biswas; A Kornberg
Journal:  J Biol Chem       Date:  1984-06-25       Impact factor: 5.157

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  33 in total

1.  Escherichia coli DNA polymerase III tau- and gamma-subunit conserved residues required for activity in vivo and in vitro.

Authors:  J R Walker; C Hervas; J D Ross; A Blinkova; M J Walbridge; E J Pumarega; M O Park; H R Neely
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

2.  A peptide switch regulates DNA polymerase processivity.

Authors:  Francisco J López de Saro; Roxana E Georgescu; Mike O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-20       Impact factor: 11.205

3.  A -1 ribosomal frameshift in the transcript that encodes the major head protein of bacteriophage A2 mediates biosynthesis of a second essential component of the capsid.

Authors:  Pilar García; Isabel Rodríguez; Juan E Suárez
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

4.  A second case of -1 ribosomal frameshifting affecting a major virion protein of the Lactobacillus bacteriophage A2.

Authors:  Isabel Rodríguez; Pilar García; Juan E Suárez
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

5.  Conservation of the Escherichia coli dnaX programmed ribosomal frameshift signal in Salmonella typhimurium.

Authors:  A Blinkova; M F Burkart; T D Owens; J R Walker
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

Review 6.  Loading clamps for DNA replication and repair.

Authors:  Linda B Bloom
Journal:  DNA Repair (Amst)       Date:  2009-02-11

Review 7.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

8.  Fate of the replisome following arrest by UV-induced DNA damage in Escherichia coli.

Authors:  H Arthur Jeiranian; Brandy J Schalow; Charmain T Courcelle; Justin Courcelle
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-25       Impact factor: 11.205

9.  holE, the gene coding for the theta subunit of DNA polymerase III of Escherichia coli: characterization of a holE mutant and comparison with a dnaQ (epsilon-subunit) mutant.

Authors:  S C Slater; M R Lifsics; M O'Donnell; R Maurer
Journal:  J Bacteriol       Date:  1994-02       Impact factor: 3.490

10.  Role of accessory DNA polymerases in DNA replication in Escherichia coli: analysis of the dnaX36 mutator mutant.

Authors:  Damian Gawel; Phuong T Pham; Iwona J Fijalkowska; Piotr Jonczyk; Roel M Schaaper
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

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