Literature DB >> 8369438

Solid state NMR study of [epsilon-13C]Lys-bacteriorhodopsin: Schiff base photoisomerization.

M R Farrar1, K V Lakshmi, S O Smith, R S Brown, J Raap, J Lugtenburg, R G Griffin, J Herzfeld.   

Abstract

Previous solid state 13C-NMR studies of bacteriorhodopsin (bR) have inferred the C = N configuration of the retinal-n class="Chemical">lysine Schiff base linkage from the [14-13C]retinal chemical shift (1-3). Here we verify the interpretation of the [14-13C]-retinal data using the [epsilon-13C]lysine 216 resonance. The epsilon-Lys-216 chemical shifts in bR555 (48 ppm) and bR568 (53 ppm) are consistent with a C = N isomerization from syn in bR555 to anti in bR568. The M photointermediate was trapped at pH 10.0 and low temperatures by illumination of samples containing either 0.5 M guanidine-HCl or 0.1 M NaCl. In both preparations, the [epsilon-13C]Lys-216 resonance of M is 6 ppm downfield from that of bR568. This shift is attributed to deprotonation of the Schiff base nitrogen and is consistent with the idea that the M intermediate contains a C = N anti chromophore. M is the only intermediate trapped in the presence of 0.5 M guanidine-HCl, whereas a second species, X, is trapped in the presence of 0.1 M NaCl. The [epsilon-13C]Lys-216 resonance of X is coincident with the signal for bR568, indicating that X is either C = N anti and protonated or C = N syn and deprotonated.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8369438      PMCID: PMC1225725          DOI: 10.1016/S0006-3495(93)81065-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  17 in total

1.  The structure of visual pigments. I. Carbon-13 nuclear magnetic resonance spectroscopy of N-all-trans-retinylidenepropylimine and its protonated species.

Authors:  J Shriver; E W Abrahamson; G D Mateescu
Journal:  J Am Chem Soc       Date:  1976-04-28       Impact factor: 15.419

2.  Resonance Raman studies of the purple membrane.

Authors:  B Aton; A G Doukas; R H Callender; B Becher; T G Ebrey
Journal:  Biochemistry       Date:  1977-06-28       Impact factor: 3.162

3.  Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

4.  Tunable laser resonance raman spectroscopy of bacteriorhodopsin.

Authors:  A Lewis; J Spoonhower; R A Bogomolni; R H Lozier; W Stoeckenius
Journal:  Proc Natl Acad Sci U S A       Date:  1974-11       Impact factor: 11.205

5.  Growth and nutrition of extremely halophilic bacteria.

Authors:  M B Gochnauer; D J Kushner
Journal:  Can J Microbiol       Date:  1969-10       Impact factor: 2.419

6.  Solid-state nitrogen-15 nuclear magnetic resonance study of the Schiff base in bacteriorhodopsin.

Authors:  G S Harbison; J Herzfeld; R G Griffin
Journal:  Biochemistry       Date:  1983-01-04       Impact factor: 3.162

7.  Presence of mutagens in Dutch surface water and effects of water treatment processes for drinking water preparation.

Authors:  M A van der Gaag; A Noordsij; J P Oranje
Journal:  Prog Clin Biol Res       Date:  1982

8.  Mechanism of proton pumping in bacteriorhodopsin by solid-state NMR: the protonation state of tyrosine in the light-adapted and M states.

Authors:  A E McDermott; L K Thompson; C Winkel; M R Farrar; S Pelletier; J Lugtenburg; J Herzfeld; R G Griffin
Journal:  Biochemistry       Date:  1991-08-27       Impact factor: 3.162

9.  Functions of a new photoreceptor membrane.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Proc Natl Acad Sci U S A       Date:  1973-10       Impact factor: 11.205

10.  Dark-adapted bacteriorhodopsin contains 13-cis, 15-syn and all-trans, 15-anti retinal Schiff bases.

Authors:  G S Harbison; S O Smith; J A Pardoen; C Winkel; J Lugtenburg; J Herzfeld; R Mathies; R G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  1984-03       Impact factor: 11.205

View more
  6 in total

1.  Retinal Configuration of ppR Intermediates Revealed by Photoirradiation Solid-State NMR and DFT.

Authors:  Yoshiteru Makino; Izuru Kawamura; Takashi Okitsu; Akimori Wada; Naoki Kamo; Yuki Sudo; Kazuyoshi Ueda; Akira Naito
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

2.  Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein.

Authors:  Shenlin Wang; Rachel A Munro; Lichi Shi; Izuru Kawamura; Takashi Okitsu; Akimori Wada; So-Young Kim; Kwang-Hwan Jung; Leonid S Brown; Vladimir Ladizhansky
Journal:  Nat Methods       Date:  2013-09-08       Impact factor: 28.547

3.  Proton transfer reactions in the red light-activatable channelrhodopsin variant ReaChR and their relevance for its function.

Authors:  Joel C D Kaufmann; Benjamin S Krause; Christiane Grimm; Eglof Ritter; Peter Hegemann; Franz J Bartl
Journal:  J Biol Chem       Date:  2017-06-28       Impact factor: 5.157

4.  Solid-State NMR Spectroscopy on Microbial Rhodopsins.

Authors:  Clara Nassrin Kriebel; Johanna Becker-Baldus; Clemens Glaubitz
Journal:  Methods Mol Biol       Date:  2022

5.  Structural characterization of the L-to-M transition of the bacteriorhodopsin photocycle.

Authors:  F M Hendrickson; F Burkard; R M Glaeser
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

6.  6-s-cis Conformation and polar binding pocket of the retinal chromophore in the photoactivated state of rhodopsin.

Authors:  Shivani Ahuja; Markus Eilers; Amiram Hirshfeld; Elsa C Y Yan; Martine Ziliox; Thomas P Sakmar; Mordechai Sheves; Steven O Smith
Journal:  J Am Chem Soc       Date:  2009-10-28       Impact factor: 15.419

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.