Literature DB >> 9726946

Structural characterization of the L-to-M transition of the bacteriorhodopsin photocycle.

F M Hendrickson1, F Burkard, R M Glaeser.   

Abstract

Structural intermediates occurring in the photocycle of wild-type bacteriorhodopsin are trapped by illuminating hydrated, glucose-embedded purple membrane at 170 K, 220 K, 230 K, and 240 K. We characterize light-induced changes in protein conformation by electron diffraction difference Fourier maps, and relate these to previous work on photocycle intermediates by infrared (FTIR) spectroscopy. Samples illuminated at 170 K are confirmed by FTIR spectroscopy to be in the L state; a difference Fourier projection map shows no structural change within the 0.35-nm resolution limit of our data. Difference maps obtained with samples illuminated at 220 K, 230 K, and 240 K, respectively, reveal a progressively larger structural response in helix F when the protein is still in the M state, as judged by the FTIR spectra. Consistent with previous structural studies, an adjustment in the position or in the degree of ordering of helix G accompanies this motion. The model of the photocycle emerging from this and previous studies is that bacteriorhodopsin experiences minimal change in protein structure until a proton is transferred from the Schiff base to Asp85. The M intermediate then undergoes a conformational evolution that opens a hydrated "half-channel," allowing the subsequent reprotonation of the Schiff base by Asp96.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9726946      PMCID: PMC1299819          DOI: 10.1016/S0006-3495(98)74063-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

Review 2.  From femtoseconds to biology: mechanism of bacteriorhodopsin's light-driven proton pump.

Authors:  R A Mathies; S W Lin; J B Ames; W T Pollard
Journal:  Annu Rev Biophys Biophys Chem       Date:  1991

3.  Structural changes in bacteriorhodopsin during proton translocation revealed by neutron diffraction.

Authors:  N A Dencher; D Dresselhaus; G Zaccai; G Büldt
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

4.  Interaction of tryptophan-182 with the retinal 9-methyl group in the L intermediate of bacteriorhodopsin.

Authors:  Y Yamazaki; J Sasaki; M Hatanaka; H Kandori; A Maeda; R Needleman; T Shinada; K Yoshihara; L S Brown; J K Lanyi
Journal:  Biochemistry       Date:  1995-01-17       Impact factor: 3.162

5.  Glutamic acid 204 is the terminal proton release group at the extracellular surface of bacteriorhodopsin.

Authors:  L S Brown; J Sasaki; H Kandori; A Maeda; R Needleman; J K Lanyi
Journal:  J Biol Chem       Date:  1995-11-10       Impact factor: 5.157

6.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

7.  Resonance Raman evidence for an all-trans to 13-cis isomerization in the proton-pumping cycle of bacteriorhodopsin.

Authors:  M Braiman; R Mathies
Journal:  Biochemistry       Date:  1980-11-11       Impact factor: 3.162

8.  Protein changes associated with reprotonation of the Schiff base in the photocycle of Asp96-->Asn bacteriorhodopsin. The MN intermediate with unprotonated Schiff base but N-like protein structure.

Authors:  J Sasaki; Y Shichida; J K Lanyi; A Maeda
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

9.  Water structural changes at the proton uptake site (the Thr46-Asp96 domain) in the L intermediate of bacteriorhodopsin.

Authors:  Y Yamazaki; M Hatanaka; H Kandori; J Sasaki; W F Karstens; J Raap; J Lugtenburg; M Bizounok; J Herzfeld; R Needleman
Journal:  Biochemistry       Date:  1995-05-30       Impact factor: 3.162

10.  Tyrosine and carboxyl protonation changes in the bacteriorhodopsin photocycle. 1. M412 and L550 intermediates.

Authors:  P Roepe; P L Ahl; S K Das Gupta; J Herzfeld; K J Rothschild
Journal:  Biochemistry       Date:  1987-10-20       Impact factor: 3.162

View more
  5 in total

Review 1.  Bioenergetics of the Archaea.

Authors:  G Schäfer; M Engelhard; V Müller
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

2.  Structure of the bacteriorhodopsin mutant F219L N intermediate revealed by electron crystallography.

Authors:  J Vonck
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

3.  Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.

Authors:  M T Facciotti; S Rouhani; F T Burkard; F M Betancourt; K H Downing; R B Rose; G McDermott; R M Glaeser
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

4.  Water pathways in the bacteriorhodopsin proton pump.

Authors:  Ana-Nicoleta Bondar; Stefan Fischer; Jeremy C Smith
Journal:  J Membr Biol       Date:  2010-11-28       Impact factor: 1.843

5.  Significance of low-frequency local fluctuation motions in the transmembrane B and C alpha-helices of bacteriorhodopsin, to facilitate efficient proton uptake from the cytoplasmic surface, as revealed by site-directed solid-state 13C NMR.

Authors:  Atsushi Kira; Michikazu Tanio; Satoru Tuzi; Hazime Saitô
Journal:  Eur Biophys J       Date:  2004-05-05       Impact factor: 1.733

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.