Literature DB >> 8357792

Three-dimensional structures and properties of a transforming and a nontransforming glycine-12 mutant of p21H-ras.

S M Franken1, A J Scheidig, U Krengel, H Rensland, A Lautwein, M Geyer, K Scheffzek, R S Goody, H R Kalbitzer, E F Pai.   

Abstract

The three-dimensional structures and biochemical properties of two mutants of the G-domain (residues 1-166) of p21H-ras, p21 (G12D) and p21 (G12P), have been determined in the triphosphate-bound form using guanosine 5'-(beta,gamma-imido)triphosphate (GppNHp). They correspond to the most frequent oncogenic and the only nononcogenic mutation of Gly-12, respectively. The G12D mutation is the only mutant analyzed so far that crystallizes in a space group different from wild type, and the atomic model of the protein shows the most drastic changes of structure around the active site as compared to wild-type p21. This is due to the interactions of the aspartic acid side chain with Tyr-32, Gln-61, and the gamma-phosphate, which result in reduced mobility of these structural elements. The interaction between the carboxylate group of Asp-12 and the gamma-phosphate is mediated by a shared proton, which we show by 31P NMR measurements to exist in solution as well. The structure of p21 (G12P) is remarkably similar to that of wild-type p21 in the active site, including the position of the nucleophilic water. The pyrrolidine ring of Pro-12 points outward and seems to be responsible for the weaker affinity toward GAP (GTPase-activating protein) and the failure of GAP to stimulate GTP hydrolysis.

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Year:  1993        PMID: 8357792     DOI: 10.1021/bi00084a005

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  26 in total

1.  A Burkholderia pseudomallei type III secreted protein, BopE, facilitates bacterial invasion of epithelial cells and exhibits guanine nucleotide exchange factor activity.

Authors:  Mark P Stevens; Andrea Friebel; Lowrie A Taylor; Michael W Wood; Philip J Brown; Wolf-Dietrich Hardt; Edouard E Galyov
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

2.  Allosteric modulation of Ras-GTP is linked to signal transduction through RAF kinase.

Authors:  Greg Buhrman; V S Senthil Kumar; Murat Cirit; Jason M Haugh; Carla Mattos
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

3.  Allosteric modulation of Ras positions Q61 for a direct role in catalysis.

Authors:  Greg Buhrman; Genevieve Holzapfel; Susan Fetics; Carla Mattos
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-01       Impact factor: 11.205

Review 4.  Ras-Specific GTPase-Activating Proteins-Structures, Mechanisms, and Interactions.

Authors:  Klaus Scheffzek; Giridhar Shivalingaiah
Journal:  Cold Spring Harb Perspect Med       Date:  2019-03-01       Impact factor: 6.915

5.  Neutron Crystal Structure of RAS GTPase Puts in Question the Protonation State of the GTP γ-Phosphate.

Authors:  Ryan Knihtila; Genevieve Holzapfel; Kevin Weiss; Flora Meilleur; Carla Mattos
Journal:  J Biol Chem       Date:  2015-10-29       Impact factor: 5.157

6.  Nucleotide binding to the G12V-mutant of Cdc42 investigated by X-ray diffraction and fluorescence spectroscopy: two different nucleotide states in one crystal.

Authors:  M G Rudolph; A Wittinghofer; I R Vetter
Journal:  Protein Sci       Date:  1999-04       Impact factor: 6.725

7.  Ab initio study of the role of lysine 16 for the molecular switching mechanism of Ras protein p21.

Authors:  N Futatsugi; M Hata; T Hoshino; M Tsuda
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

8.  Guanosine triphosphatase stimulation of oncogenic Ras mutants.

Authors:  M R Ahmadian; T Zor; D Vogt; W Kabsch; Z Selinger; A Wittinghofer; K Scheffzek
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

9.  The distinct conformational dynamics of K-Ras and H-Ras A59G.

Authors:  Suryani Lukman; Barry J Grant; Alemayehu A Gorfe; Guy H Grant; J Andrew McCammon
Journal:  PLoS Comput Biol       Date:  2010-09-09       Impact factor: 4.475

Review 10.  Invited review: Small GTPases and their GAPs.

Authors:  Ashwini K Mishra; David G Lambright
Journal:  Biopolymers       Date:  2016-08       Impact factor: 2.505

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