Literature DB >> 10359839

Guanosine triphosphatase stimulation of oncogenic Ras mutants.

M R Ahmadian1, T Zor, D Vogt, W Kabsch, Z Selinger, A Wittinghofer, K Scheffzek.   

Abstract

Interest in the guanosine triphosphatase (GTPase) reaction of Ras as a molecular drug target stems from the observation that, in a large number of human tumors, Ras is characteristically mutated at codons 12 or 61, more rarely 13. Impaired GTPase activity, even in the presence of GTPase activating proteins, has been found to be the biochemical reason behind the oncogenicity of most Gly12/Gln61 mutations, thus preventing Ras from being switched off. Therefore, these oncogenic Ras mutants remain constitutively activated and contribute to the neoplastic phenotype of tumor cells. Here, we show that the guanosine 5'-triphosphate (GTP) analogue diaminobenzophenone-phosphoroamidate-GTP (DABP-GTP) is hydrolyzed by wild-type Ras but more efficiently by frequently occurring oncogenic Ras mutants, to yield guanosine 5'-diphosphate-bound inactive Ras and DABP-Pi. The reaction is independent of the presence of Gln61 and is most dramatically enhanced with Gly12 mutants. Thus, the defective GTPase reaction of the oncogenic Ras mutants can be rescued by using DABP-GTP instead of GTP, arguing that the GTPase switch of Ras is not irreversibly damaged. An exocyclic aromatic amino group of DABP-GTP is critical for the reaction and bypasses the putative rate-limiting step of the intrinsic Ras GTPase reaction. The crystal structures of Ras-bound DABP-beta,gamma-imido-GTP show a disordered switch I and identify the Gly12/Gly13 region as the hydrophobic patch to accommodate the DABP-moiety. The biochemical and structural studies help to define the requirements for the design of anti-Ras drugs aimed at the blocked GTPase reaction.

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Year:  1999        PMID: 10359839      PMCID: PMC22057          DOI: 10.1073/pnas.96.12.7065

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

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Journal:  J Mol Biol       Date:  1989-03-05       Impact factor: 5.469

2.  A cytoplasmic protein stimulates normal N-ras p21 GTPase, but does not affect oncogenic mutants.

Authors:  M Trahey; F McCormick
Journal:  Science       Date:  1987-10-23       Impact factor: 47.728

3.  GTP analogue hydrolysis by the Gs protein: implication for the role of catalytic glutamine in the GTPase reaction.

Authors:  T Zor; R Andorn; I Sofer; M Chorev; Z Selinger
Journal:  FEBS Lett       Date:  1998-08-21       Impact factor: 4.124

4.  Time-resolved X-ray crystallographic study of the conformational change in Ha-Ras p21 protein on GTP hydrolysis.

Authors:  I Schlichting; S C Almo; G Rapp; K Wilson; K Petratos; A Lentfer; A Wittinghofer; W Kabsch; E F Pai; G A Petsko
Journal:  Nature       Date:  1990-05-24       Impact factor: 49.962

5.  Biological and biochemical properties of human rasH genes mutated at codon 61.

Authors:  C J Der; T Finkel; G M Cooper
Journal:  Cell       Date:  1986-01-17       Impact factor: 41.582

6.  Biological properties of human c-Ha-ras1 genes mutated at codon 12.

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Journal:  Nature       Date:  1984 Nov 1-7       Impact factor: 49.962

7.  Analysis of RAS oncogene mutations in human lymphoid malignancies.

Authors:  A Neri; D M Knowles; A Greco; F McCormick; R Dalla-Favera
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

Review 8.  ras oncogenes in human cancer: a review.

Authors:  J L Bos
Journal:  Cancer Res       Date:  1989-09-01       Impact factor: 12.701

Review 9.  Tumor cell instability, diversification, and progression to the metastatic phenotype: from oncogene to oncofetal expression.

Authors:  G L Nicolson
Journal:  Cancer Res       Date:  1987-03-15       Impact factor: 12.701

10.  Expression of p21 proteins in Escherichia coli and stereochemistry of the nucleotide-binding site.

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Journal:  EMBO J       Date:  1986-06       Impact factor: 11.598

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  28 in total

1.  The conformation of bound GMPPNP suggests a mechanism for gating the active site of the SRP GTPase.

Authors:  S Padmanabhan; D M Freymann
Journal:  Structure       Date:  2001-09       Impact factor: 5.006

2.  Total chemical synthesis of a functional interacting protein pair: the protooncogene H-Ras and the Ras-binding domain of its effector c-Raf1.

Authors:  Christian F W Becker; Christie L Hunter; Ralf Seidel; Stephen B H Kent; Roger S Goody; Martin Engelhard
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-18       Impact factor: 11.205

3.  Spontaneous nucleotide exchange in low molecular weight GTPases by fluorescently labeled gamma-phosphate-linked GTP analogs.

Authors:  Jonas Korlach; Daniel W Baird; Ahmed A Heikal; Kyle R Gee; Gregory R Hoffman; Watt W Webb
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-18       Impact factor: 11.205

4.  Src promotes GTPase activity of Ras via tyrosine 32 phosphorylation.

Authors:  Severa Bunda; Pardeep Heir; Tharan Srikumar; Jonathan D Cook; Kelly Burrell; Yoshihito Kano; Jeffrey E Lee; Gelareh Zadeh; Brian Raught; Michael Ohh
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-25       Impact factor: 11.205

5.  Ras Binder Induces a Modified Switch-II Pocket in GTP and GDP States.

Authors:  Daniel R Gentile; Manoj K Rathinaswamy; Meredith L Jenkins; Steven M Moss; Braden D Siempelkamp; Adam R Renslo; John E Burke; Kevan M Shokat
Journal:  Cell Chem Biol       Date:  2017-10-12       Impact factor: 8.116

6.  Interaction of a novel fluorescent GTP analogue with the small G-protein K-Ras.

Authors:  Seigo Iwata; Kaori Masuhara; Nobuhisa Umeki; Yasushi Sako; Shinsaku Maruta
Journal:  J Biochem       Date:  2015-07-15       Impact factor: 3.387

Review 7.  Small-molecule modulation of Ras signaling.

Authors:  Jochen Spiegel; Philipp M Cromm; Gunther Zimmermann; Tom N Grossmann; Herbert Waldmann
Journal:  Nat Chem Biol       Date:  2014-06-15       Impact factor: 15.040

8.  Genotype and phenotype spectrum of NRAS germline variants.

Authors:  Franziska Altmüller; Christina Lissewski; Debora Bertola; Elisabetta Flex; Zornitza Stark; Stephanie Spranger; Gareth Baynam; Michelle Buscarilli; Sarah Dyack; Jane Gillis; Helger G Yntema; Francesca Pantaleoni; Rosa LE van Loon; Sara MacKay; Kym Mina; Ina Schanze; Tiong Yang Tan; Maie Walsh; Susan M White; Marena R Niewisch; Sixto García-Miñaúr; Diego Plaza; Mohammad Reza Ahmadian; Hélène Cavé; Marco Tartaglia; Martin Zenker
Journal:  Eur J Hum Genet       Date:  2017-05-03       Impact factor: 4.246

Review 9.  Invited review: Small GTPases and their GAPs.

Authors:  Ashwini K Mishra; David G Lambright
Journal:  Biopolymers       Date:  2016-08       Impact factor: 2.505

10.  Crystal structure of the GTPase-activating protein-related domain from IQGAP1.

Authors:  Vinodh B Kurella; Jessica M Richard; Courtney L Parke; Louis F Lecour; Henry D Bellamy; David K Worthylake
Journal:  J Biol Chem       Date:  2009-03-25       Impact factor: 5.157

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