Literature DB >> 8347586

A new function of S-adenosylmethionine: the ribosyl moiety of AdoMet is the precursor of the cyclopentenediol moiety of the tRNA wobble base queuine.

R K Slany1, M Bösl, P F Crain, H Kersten.   

Abstract

Queuosine (Q) [7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deaz agu anosine] usually occurs in the first position of the anticodon of tRNAs specifying the amino acids asparagine, aspartate, histidine, and tyrosine. The hypermodified nucleoside is found in eubacteria and eucaryotes. Q is synthesized de novo exclusively in eubacteria; for eucaryotes the compound is a nutrient factor. In Escherichia coli the Q precursor (oQ), carrying a 2,3-epoxy-4,5-dihydroxycyclopentane ring, is formed from tRNA precursors containing 7-(aminomethyl)-7-deazaguanine (preQ1) by the queA gene product. A genomic queA mutant accumulating preQ1 tRNA was constructed. The QueA enzyme was overexpressed as a fusion protein with the glutathione S-transferase from Schistosoma japonicum and purified to homogeneity by affinity and anion-exchange chromatography. The enzyme QueA synthesizes oQ from preQ1 in a single S-adenosylmethionine- (AdoMet-) requiring step, indicating that the ribosyl moiety of AdoMet is transferred and isomerized to the epoxycyclopentane residue of oQ. The identity of oQ was verified by HPLC and directly combined HPLC/mass spectrometry. The formation of oQ was reconstituted in vitro, applying a synthetic RNA. A 17-nucleotide microhelix (corresponding to the anticodon stem and loop of tRNA(Tyr) from E. coli) is sufficient to act as the RNA substrate for oQ synthesis. We propose that QueA is an S-adenosylmethionine:tRNA ribosyltransferase-isomerase.

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Year:  1993        PMID: 8347586     DOI: 10.1021/bi00081a028

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  26 in total

Review 1.  Some unusual nucleic acid bases are products of hydroxyl radical oxidation of DNA and RNA.

Authors:  J Barciszewski; M Z Barciszewska; G Siboska; S I Rattan; B F Clark
Journal:  Mol Biol Rep       Date:  1999-12       Impact factor: 2.316

Review 2.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

3.  Crystal structure of tRNA-guanine transglycosylase: RNA modification by base exchange.

Authors:  C Romier; K Reuter; D Suck; R Ficner
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

Review 4.  Radical SAM enzymes involved in the biosynthesis of purine-based natural products.

Authors:  Vahe Bandarian
Journal:  Biochim Biophys Acta       Date:  2012-08-03

Review 5.  Biosynthesis of pyrrolopyrimidines.

Authors:  Reid M McCarty; Vahe Bandarian
Journal:  Bioorg Chem       Date:  2012-01-31       Impact factor: 5.275

6.  Mutations in the S-Adenosylmethionine Synthetase Genes SAM1 and SAM2 Differentially Affect Genome Stability in Saccharomyces cerevisiae.

Authors:  Kellyn M Hoffert; Kathryn S P Higginbotham; Justin T Gibson; Stuart Oehrle; Erin D Strome
Journal:  Genetics       Date:  2019-07-18       Impact factor: 4.562

7.  Genetic analysis identifies a function for the queC (ybaX) gene product at an initial step in the queuosine biosynthetic pathway in Escherichia coli.

Authors:  Rahul Gaur; Umesh Varshney
Journal:  J Bacteriol       Date:  2005-10       Impact factor: 3.490

Review 8.  Metabolism of sulfur amino acids in Saccharomyces cerevisiae.

Authors:  D Thomas; Y Surdin-Kerjan
Journal:  Microbiol Mol Biol Rev       Date:  1997-12       Impact factor: 11.056

9.  Biosynthesis of 7-deazaguanosine-modified tRNA nucleosides: a new role for GTP cyclohydrolase I.

Authors:  Gabriella Phillips; Basma El Yacoubi; Benjamin Lyons; Sophie Alvarez; Dirk Iwata-Reuyl; Valérie de Crécy-Lagard
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

Review 10.  Radical-mediated ring contraction in the biosynthesis of 7-deazapurines.

Authors:  Vahe Bandarian; Catherine L Drennan
Journal:  Curr Opin Struct Biol       Date:  2015-11-28       Impact factor: 6.809

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