Literature DB >> 8312486

Study of the photocycle and charge motions of the bacteriorhodopsin mutant D96N.

C Gergely1, C Ganea, G Groma, G Váró.   

Abstract

Absorption kinetic and electric measurements were performed on oriented purple membranes of D96N bacteriorhodopsin mutant embedded in polyacrylamide gel and the kinetic parameters of the photointermediates determined. The rate constants, obtained from fits to time-dependent concentrations, were used to calculate the relative electrogenicity of the intermediates. The signals were analyzed on the basis of different photocycle models. The preferred model is the sequential one with reversible reaction. To improve the quality of the fits the necessity of introducing a second L intermediate arose. We also attempted to interpret our data in the view of reversible reactions containing two parallel photocycles, but the pH dependencies of the rate constants and electrogenicities favored the model containing sequential reversible transitions. A fast equilibrium for the L2<==>M1 transition and a strong pH dependence of the M2 electrogenicity was found, indicating that the M1 to M2 transition involves complex charge motions, as is expected in a conformational change of the protein.

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Year:  1993        PMID: 8312486      PMCID: PMC1225989          DOI: 10.1016/S0006-3495(93)81308-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

Review 1.  Proton transfer and energy coupling in the bacteriorhodopsin photocycle.

Authors:  J K Lanyi
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

2.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

Review 3.  From femtoseconds to biology: mechanism of bacteriorhodopsin's light-driven proton pump.

Authors:  R A Mathies; S W Lin; J B Ames; W T Pollard
Journal:  Annu Rev Biophys Biophys Chem       Date:  1991

4.  The role of back-reactions and proton uptake during the N----O transition in bacteriorhodopsin's photocycle: a kinetic resonance Raman study.

Authors:  J B Ames; R A Mathies
Journal:  Biochemistry       Date:  1990-08-07       Impact factor: 3.162

5.  Bacteriorhodopsin mutants of Halobacterium sp. GRB. II. Characterization of mutants.

Authors:  J Soppa; J Otomo; J Straub; J Tittor; S Meessen; D Oesterhelt
Journal:  J Biol Chem       Date:  1989-08-05       Impact factor: 5.157

6.  Pathways of the rise and decay of the M photointermediate(s) of bacteriorhodopsin.

Authors:  G Váró; J K Lanyi
Journal:  Biochemistry       Date:  1990-03-06       Impact factor: 3.162

7.  Photoelectric signals from dried oriented purple membranes of Halobacterium halobium.

Authors:  G Váró; L Keszthelyi
Journal:  Biophys J       Date:  1983-07       Impact factor: 4.033

8.  Aspartic acid substitutions affect proton translocation by bacteriorhodopsin.

Authors:  T Mogi; L J Stern; T Marti; B H Chao; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

9.  Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement.

Authors:  M Holz; L A Drachev; T Mogi; H Otto; A D Kaulen; M P Heyn; V P Skulachev; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

10.  A defective proton pump, point-mutated bacteriorhodopsin Asp96----Asn is fully reactivated by azide.

Authors:  J Tittor; C Soell; D Oesterhelt; H J Butt; E Bamberg
Journal:  EMBO J       Date:  1989-11       Impact factor: 11.598

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  17 in total

1.  Charge motions during the photocycle of pharaonis halorhodopsin.

Authors:  K Ludmann; G Ibron; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

2.  Interpretation of the spatial charge displacements in bacteriorhodopsin in terms of structural changes during the photocycle.

Authors:  A Dér; L Oroszi; A Kulcsár; L Zimányi; R Tóth-Boconádi; L Keszthelyi; W Stoeckenius; P Ormos
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

3.  Singular value decomposition with self-modeling applied to determine bacteriorhodopsin intermediate spectra: analysis of simulated data.

Authors:  L Zimányi; A Kulcsár; J K Lanyi; D F Sears; J Saltiel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

4.  Characterization of the proton-transporting photocycle of pharaonis halorhodopsin.

Authors:  A Kulcsár; G I Groma; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

5.  Characterization of the azide-dependent bacteriorhodopsin-like photocycle of salinarum halorhodopsin.

Authors:  Melinda Lakatos; Géza I Groma; Constanta Ganea; Janos K Lanyi; György Váró
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

6.  The photochemical reaction cycle of proteorhodopsin at low pH.

Authors:  Melinda Lakatos; Janos K Lanyi; Juliánna Szakács; György Váró
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

7.  Characterization of the photochemical reaction cycle of proteorhodopsin.

Authors:  György Váró; Leonid S Brown; Melinda Lakatos; Janos K Lanyi
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

8.  Direct measurement of the photoelectric response time of bacteriorhodopsin via electro-optic sampling.

Authors:  J Xu; A B Stickrath; P Bhattacharya; J Nees; G Váró; J R Hillebrecht; L Ren; R R Birge
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

9.  Intermediate spectra and photocycle kinetics of the Asp96 --> asn mutant bacteriorhodopsin determined by singular value decomposition with self-modeling.

Authors:  L Zimányi; A Kulcsár; J K Lanyi; D F Sears; J Saltiel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

10.  A priori resolution of the intermediate spectra in the bacteriorhodopsin photocycle: the time evolution of the L spectrum revealed.

Authors:  László Zimányi; Jack Saltiel; Leonid S Brown; Janos K Lanyi
Journal:  J Phys Chem A       Date:  2006-02-23       Impact factor: 2.781

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