Literature DB >> 8265354

SnR31, snR32, and snR33: three novel, non-essential snRNAs from Saccharomyces cerevisiae.

A G Balakin1, G S Schneider, M S Corbett, J Ni, M J Fournier.   

Abstract

Genes for three novel yeast snRNAs have been identified and tested for essentiality. Partial sequence information was developed for RNA extracted from isolated nuclei and the respective gene sequences were discovered by screening a DNA sequence database. The three RNAs contain 222, 188 and 183 nucleotides and are designated snR31, snR32 and snR33, respectively. Each RNA is derived from a single copy gene. The SNR31 gene is adjacent to a gene for an unnamed protein associated with the cap-binding protein eIF-4E. The SNR32 gene is next to a gene for ribosomal protein L41 and the gene for SNR33 is on chromosome III, between two open reading frames with no known function. Genetic disruption analyses showed that none of the three snRNAs is required for growth. The new RNAs bring the number of non-spliceosomal snRNAs characterized thus far in S. cerevisiae to 14, of which only three are essential.

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Year:  1993        PMID: 8265354      PMCID: PMC310576          DOI: 10.1093/nar/21.23.5391

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  47 in total

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Authors:  S Kawai; S Murao; M Mochizuki; I Shibuya; K Yano; M Takagi
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4.  The use of heparin as a simple cost-effective means of controlling background in nucleic acid hybridization procedures.

Authors:  L Singh; K W Jones
Journal:  Nucleic Acids Res       Date:  1984-07-25       Impact factor: 16.971

5.  A comprehensive set of sequence analysis programs for the VAX.

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6.  Reactions at the termini of tRNA with T4 RNA ligase.

Authors:  A G Bruce; O C Uhlenbeck
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

7.  Yeast contains small nuclear RNAs encoded by single copy genes.

Authors:  J A Wise; D Tollervey; D Maloney; H Swerdlow; E J Dunn; C Guthrie
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8.  Mapping of the proteinase b structural gene PRB1, in Saccharomyces cerevisiae and identification of nonsense alleles within the locus.

Authors:  G S Zubenko; A P Mitchell; E W Jones
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9.  Deletion of a yeast small nuclear RNA gene impairs growth.

Authors:  D Tollervey; C Guthrie
Journal:  EMBO J       Date:  1985-12-30       Impact factor: 11.598

10.  A novel small nucleolar RNA (U16) is encoded inside a ribosomal protein intron and originates by processing of the pre-mRNA.

Authors:  P Fragapane; S Prislei; A Michienzi; E Caffarelli; I Bozzoni
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  13 in total

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Authors:  Ben Liu; Maurille J Fournier
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Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

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Authors:  J Gu; R Reddy
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

4.  The snoRNA box C/D motif directs nucleolar targeting and also couples snoRNA synthesis and localization.

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Journal:  EMBO J       Date:  1998-07-01       Impact factor: 11.598

Review 5.  Structural and evolutionary insights into ribosomal RNA methylation.

Authors:  Petr V Sergiev; Nikolay A Aleksashin; Anastasia A Chugunova; Yury S Polikanov; Olga A Dontsova
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Review 6.  Eukaryotic ribosomal RNA: the recent excitement in the nucleotide modification problem.

Authors:  B E Maden; J M Hughes
Journal:  Chromosoma       Date:  1997-06       Impact factor: 4.316

7.  The yeast SEN1 gene is required for the processing of diverse RNA classes.

Authors:  D Ursic; K L Himmel; K A Gurley; F Webb; M R Culbertson
Journal:  Nucleic Acids Res       Date:  1997-12-01       Impact factor: 16.971

8.  U21, a novel small nucleolar RNA with a 13 nt. complementarity to 28S rRNA, is encoded in an intron of ribosomal protein L5 gene in chicken and mammals.

Authors:  L H Qu; M Nicoloso; B Michot; M C Azum; M Caizergues-Ferrer; M H Renalier; J P Bachellerie
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9.  Ribosome performance is enhanced by a rich cluster of pseudouridines in the A-site finger region of the large subunit.

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10.  The putative nucleic acid helicase Sen1p is required for formation and stability of termini and for maximal rates of synthesis and levels of accumulation of small nucleolar RNAs in Saccharomyces cerevisiae.

Authors:  T P Rasmussen; M R Culbertson
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

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