Literature DB >> 8230201

Refined crystal structure of the seryl-tRNA synthetase from Thermus thermophilus at 2.5 A resolution.

M Fujinaga1, C Berthet-Colominas, A D Yaremchuk, M A Tukalo, S Cusack.   

Abstract

The three-dimensional structure of the seryl-tRNA synthetase from Thermus thermophilus has been determined and refined at 2.5 A resolution. The final model consists of a dimer of 421 residues each and 190 water molecules. The R-factor is 18.4% for all the data between 10 and 2.5 A resolution. The structure is very similar to that of the homologous enzyme from Escherichia coli, with an r.m.s. difference of 1.5 A for the 357 alpha-carbon atoms considered equivalent. The comparison of the two structures indicates increased hydrophobicity, reduced conformational entropy and reduced torsional strain as possible mechanisms by which thermostability is obtained in the enzyme from the thermophile.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8230201     DOI: 10.1006/jmbi.1993.1576

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  25 in total

1.  Crystal structure of a eukaryote/archaeon-like protyl-tRNA synthetase and its complex with tRNAPro(CGG).

Authors:  A Yaremchuk; S Cusack; M Tukalo
Journal:  EMBO J       Date:  2000-09-01       Impact factor: 11.598

2.  The crystal structure of the ternary complex of T.thermophilus seryl-tRNA synthetase with tRNA(Ser) and a seryl-adenylate analogue reveals a conformational switch in the active site.

Authors:  S Cusack; A Yaremchuk; M Tukalo
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

3.  Crystallization and preliminary X-ray diffraction analysis of human cytosolic seryl-tRNA synthetase.

Authors:  Jean Baptiste Artero; Susana C M Teixeira; Edward P Mitchell; Michael A Kron; V Trevor Forsyth; Michael Haertlein
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

Review 4.  Structure, function and evolution of seryl-tRNA synthetases: implications for the evolution of aminoacyl-tRNA synthetases and the genetic code.

Authors:  M Härtlein; S Cusack
Journal:  J Mol Evol       Date:  1995-05       Impact factor: 2.395

5.  MultiCoil: a program for predicting two- and three-stranded coiled coils.

Authors:  E Wolf; P S Kim; B Berger
Journal:  Protein Sci       Date:  1997-06       Impact factor: 6.725

6.  Characterization of a temperature-sensitive Escherichia coli mutant and revertants with altered seryl-tRNA synthetase activity.

Authors:  M L Ferri; C Vincent; R Leberman; M Härtlein
Journal:  J Bacteriol       Date:  1997-04       Impact factor: 3.490

7.  Thermostable repair enzyme for oxidative DNA damage from extremely thermophilic bacterium, Thermus thermophilus HB8.

Authors:  T Mikawa; R Kato; M Sugahara; S Kuramitsu
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

Review 8.  Emergence and evolution.

Authors:  Tammy J Bullwinkle; Michael Ibba
Journal:  Top Curr Chem       Date:  2014

9.  Designing seryl-tRNA synthetase for improved serylation of selenocysteine tRNAs.

Authors:  Xian Fu; Ana Crnković; Anastasia Sevostyanova; Dieter Söll
Journal:  FEBS Lett       Date:  2018-10-24       Impact factor: 4.124

10.  Crystal structure of human Seryl-tRNA synthetase and Ser-SA complex reveals a molecular lever specific to higher eukaryotes.

Authors:  Xiaoling Xu; Yi Shi; Xiang-Lei Yang
Journal:  Structure       Date:  2013-10-03       Impact factor: 5.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.