Literature DB >> 8224872

Sequence of the gene coding for ribosomal protein S8 of Xenopus laevis.

P Mariottini1, C Bagni, A Francesconi, F Cecconi, M J Serra, Q M Chen, F Loreni, F Annesi, F Amaldi.   

Abstract

We present here the cloning and the entire sequence of one of the two gene copies coding for ribosomal protein (r-protein) S8 in Xenopus laevis (corresponding to r-protein S7 in rat) and its flanking regions. The S8a gene contains seven exons and six introns for a total length of about 12,700 bp coding for a mRNA of 663 nucleotides (nt) plus a poly(A) tail. Mapping of the 5' end of the gene has shown that the transcription start point is located in a pyrimidine-rich tract, as has been observed for all r-protein-encoding genes of X. laevis and other vertebrates so far characterized. A computer analysis of the S8a sequence has revealed the presence of a 220-nt sequence repeated, with some variations, once in each of the six introns. RNA analysis by hybridization with oligo probes specific for the two gene copies coding for r-protein S8 has demonstrated that the two of them are expressed at similar levels both in oocytes and in embryos.

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Year:  1993        PMID: 8224872     DOI: 10.1016/0378-1119(93)90204-g

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  6 in total

1.  A functional role for some Fugu introns larger than the typical short ones: the example of the gene coding for ribosomal protein S7 and snoRNA U17.

Authors:  F Cecconi; C Crosio; P Mariottini; G Cesareni; M Giorgi; S Brenner; F Amaldi
Journal:  Nucleic Acids Res       Date:  1996-08-15       Impact factor: 16.971

2.  La protein has a positive effect on the translation of TOP mRNAs in vivo.

Authors:  C Crosio; P P Boyl; F Loreni; P Pierandrei-Amaldi; F Amaldi
Journal:  Nucleic Acids Res       Date:  2000-08-01       Impact factor: 16.971

3.  Functional characterization of transcriptional regulatory elements in the upstream region and intron 1 of the human S6 ribosomal protein gene.

Authors:  M Antoine; P Kiefer
Journal:  Biochem J       Date:  1998-12-01       Impact factor: 3.857

Review 4.  Aspects of regulation of ribosomal protein synthesis in Xenopus laevis. Review.

Authors:  P Pierandrei-Amaldi; F Amaldi
Journal:  Genetica       Date:  1994       Impact factor: 1.082

5.  The Xenopus intron-encoded U17 snoRNA is produced by exonucleolytic processing of its precursor in oocytes.

Authors:  F Cecconi; P Mariottini; F Amaldi
Journal:  Nucleic Acids Res       Date:  1995-11-25       Impact factor: 16.971

6.  U17XS8, a small nucleolar RNA with a 12 nt complementarity to 18S rRNA and coded by a sequence repeated in the six introns of Xenopus laevis ribosomal protein S8 gene.

Authors:  F Cecconi; P Mariottini; F Loreni; P Pierandrei-Amaldi; N Campioni; F Amaldi
Journal:  Nucleic Acids Res       Date:  1994-03-11       Impact factor: 16.971

  6 in total

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