Literature DB >> 8217868

DNA typing of urine samples following several years of storage.

M Prinz1, W Grellner, C Schmitt.   

Abstract

The possibility of typing DNA polymorphisms on urine samples was investigated in a controlled storage experiment and for samples that were 1-7 years old. Female urine samples showed a higher amount of epithelial cells and therefore a higher DNA yield. Employing the polymerase chain reaction, specific amplification results were achieved for all samples over a 6 month storage period. The microscopical examination of the samples revealed not only differing degrees of contamination with bacteria, yeasts and fungi, but also the presence of still intact epithelial cells. Only 20% of the male samples and 32% of the female samples yielded specific amplification results. By separating the human cells from the contaminating organisms prior to DNA extraction, the number of successfully typed samples could be improved to 35% of the male and 77% of the female samples. This result confirms that excess amounts of co-extracted non-human DNA can inhibit the specific amplification of human target sequences.

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Year:  1993        PMID: 8217868     DOI: 10.1007/bf01225044

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  12 in total

1.  Population genetics and forensic efficiency data of 4 AMPFLP's.

Authors:  S Rand; C Puers; K Skowasch; P Wiegand; B Budowle; B Brinkmann
Journal:  Int J Legal Med       Date:  1992       Impact factor: 2.686

2.  Forensic identification of urine samples.

Authors:  B Brinkmann; S Rand; T Bajanowski
Journal:  Int J Legal Med       Date:  1992       Impact factor: 2.686

3.  Stain analysis using oligonucleotide probes specific for simple repetitive DNA sequences.

Authors:  L Roewer; P Nürnberg; E Fuhrmann; M Rose; O Prokop; J T Epplen
Journal:  Forensic Sci Int       Date:  1990-08       Impact factor: 2.395

4.  DNA typing of forensic material with mixed genotypes using allele-specific enzymatic amplification (polymerase chain reaction).

Authors:  U B Gyllensten; A Josefsson; K Schemschat; T Saldeen; U Petterson
Journal:  Forensic Sci Int       Date:  1992-01       Impact factor: 2.395

5.  Polymerase chain reaction amplification products separated on rehydratable polyacrylamide gels and stained with silver.

Authors:  R C Allen; G Graves; B Budowle
Journal:  Biotechniques       Date:  1989 Jul-Aug       Impact factor: 1.993

6.  Amplification of DNA from epithelial cells in urine.

Authors:  P Gasparini; A Savoia; P F Pignatti; B Dallapiccola; G Novelli
Journal:  N Engl J Med       Date:  1989-03-23       Impact factor: 91.245

7.  ABO typing studies on liquid urines.

Authors:  M G Chase
Journal:  J Forensic Sci       Date:  1986-07       Impact factor: 1.832

8.  DNA amplification to enhance detection of genetically engineered bacteria in environmental samples.

Authors:  R J Steffan; R M Atlas
Journal:  Appl Environ Microbiol       Date:  1988-09       Impact factor: 4.792

9.  The detection of group-specific component from urine samples.

Authors:  P R Mills; M G Chase
Journal:  Forensic Sci Int       Date:  1989-12       Impact factor: 2.395

10.  Forensic application of DNA 'fingerprints'.

Authors:  P Gill; A J Jeffreys; D J Werrett
Journal:  Nature       Date:  1985 Dec 12-18       Impact factor: 49.962

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  10 in total

1.  Comparative study of seven commercial kits for human DNA extraction from urine samples suitable for DNA biomarker-based public health studies.

Authors:  Latifa El Bali; Aurélie Diman; Alfred Bernard; Nancy H C Roosens; Sigrid C J De Keersmaecker
Journal:  J Biomol Tech       Date:  2014-12

2.  Forensic identification of urine samples: a comparison between nuclear and mitochondrial DNA markers.

Authors:  V Castella; N Dimo-Simonin; C Brandt-Casadevall; N Robinson; M Saugy; F Taroni; P Mangin
Journal:  Int J Legal Med       Date:  2005-08-30       Impact factor: 2.686

3.  Validation of mitochondrial DNA sequencing for forensic casework analysis.

Authors:  M R Wilson; J A DiZinno; D Polanskey; J Replogle; B Budowle
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

4.  Automated DNA, RNA, and Protein Extraction from Urine for Biobanking.

Authors:  Caroline Barau; Pascale Maillé; Nanor Sirab; Bijan Ghaleh; Yves Allory
Journal:  J Biomol Tech       Date:  2022-02-06

5.  Collection of genomic DNA by buccal swabs for polymerase chain reaction-based biomarker assays.

Authors:  A H Walker; D Najarian; D L White; J F Jaffe; P A Kanetsky; T R Rebbeck
Journal:  Environ Health Perspect       Date:  1999-07       Impact factor: 9.031

6.  Detection of Cancer Mutations by Urine Liquid Biopsy as a Potential Tool in the Clinical Management of Bladder Cancer Patients.

Authors:  Nurul Khalida Ibrahim; Ahmed Eraky; Jan Eggers; Tim Alexander Steiert; Susanne Sebens; Klaus-Peter Jünemann; Alexander Hendricks; Corinna Bang; Martin Stanulla; Andre Franke; Claudius Hamann; Christoph Röcken; Norbert Arnold; Laura Hinze; Michael Forster
Journal:  Cancers (Basel)       Date:  2022-02-15       Impact factor: 6.575

7.  Genetic individual identification from dried urine spots: A complementary tool to drug monitoring and anti-doping testing.

Authors:  Pierangela Grignani; Alessandro Manfredi; Maria Cristina Monti; Matteo Moretti; Luca Morini; Silvia Damiana Visonà; Paolo Fattorini; Carlo Previderè
Journal:  Drug Test Anal       Date:  2022-02-28       Impact factor: 3.234

8.  Implications of storing urinary DNA from different populations for molecular analyses.

Authors:  Angela Cannas; Glendah Kalunga; Clare Green; Ludovica Calvo; Patrick Katemangwe; Klaus Reither; Mark D Perkins; Leonard Maboko; Michael Hoelscher; Elizabeth A Talbot; Peter Mwaba; Alimuddin I Zumla; Enrico Girardi; Jim F Huggett
Journal:  PLoS One       Date:  2009-09-10       Impact factor: 3.240

9.  DNA extraction from long-term stored urine.

Authors:  Marc Hilhorst; Ruud Theunissen; Henk van Rie; Pieter van Paassen; Jan Willem Cohen Tervaert
Journal:  BMC Nephrol       Date:  2013-10-30       Impact factor: 2.388

10.  Multiplexed Microsphere Suspension-Array Assay for Urine Mitochondrial DNA Typing by C-Stretch Length in Hypervariable Regions.

Authors:  Kimiko Aoki; Hiroyuki Tanaka; Takashi Kawahara
Journal:  J Clin Med Res       Date:  2018-06-04
  10 in total

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