Literature DB >> 8547161

Validation of mitochondrial DNA sequencing for forensic casework analysis.

M R Wilson1, J A DiZinno, D Polanskey, J Replogle, B Budowle.   

Abstract

Two sets of studies were performed to evaluate the forensic utility of sequencing human mitochondrial DNA (mtDNA) derived from various tissues and amplified by the polymerase chain reaction (PCR). Sequencing was performed on a Perkin-Elmer/Applied Biosystems Division (PE/ABD) automated DNA sequencer (model 373A). The first set of experiments included typical validation studies that had previously been conducted on forensic DNA markers, such as: chemical contaminant effects on DNA from blood and semen and the effect of typing DNA extracted from body fluid samples deposited on various substrates. A second set of experiments was performed strictly on human hair shafts. These studies included typing mtDNA from hairs that were: (1) from different body areas, (2) chemically treated, (3) from deceased individuals, and (4) deliberately contaminated with various body fluids. The data confirm that PCR-based mtDNA typing by direct automated sequencing is a valid and reliable means of forensic identification.

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Year:  1995        PMID: 8547161     DOI: 10.1007/bf01369907

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  20 in total

1.  Application of DNA techniques for identification using human dental pulp as a source of DNA.

Authors:  L Pötsch; U Meyer; S Rothschild; P M Schneider; C Rittner
Journal:  Int J Legal Med       Date:  1992       Impact factor: 2.686

2.  Identification of human remains by amplification and automated sequencing of mitochondrial DNA.

Authors:  K M Sullivan; R Hopgood; P Gill
Journal:  Int J Legal Med       Date:  1992       Impact factor: 2.686

3.  The polymerase chain reaction and post-mortem forensic identity testing: application of amplified D1S80 and HLA-DQ alpha loci to the identification of fire victims.

Authors:  A Sajantila; M Ström; B Budowle; P J Karhunen; L Peltonen
Journal:  Forensic Sci Int       Date:  1991-10       Impact factor: 2.395

4.  PCR-based typing of DNA extracted from cigarette butts.

Authors:  M N Hochmeister; B Budowle; J Jung; U V Borer; C T Comey; R Dirnhofer
Journal:  Int J Legal Med       Date:  1991       Impact factor: 2.686

5.  The distribution of the HLA-DQ alpha alleles and genotypes in the Finnish population as determined by the use of DNA amplification and allele specific oligonucleotides.

Authors:  A Sajantila; M Ström; B Budowle; P J Tienari; C Ehnholm; L Peltonen
Journal:  Int J Legal Med       Date:  1991       Impact factor: 2.686

6.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

7.  PCR-amplification and detection of the human D1S80 VNTR locus. Amplification conditions, population genetics and application in forensic analysis.

Authors:  A D Kloosterman; B Budowle; P Daselaar
Journal:  Int J Legal Med       Date:  1993       Impact factor: 2.686

8.  Mitochondrial DNA sequence analysis of human skeletal remains: identification of remains from the Vietnam War.

Authors:  M M Holland; D L Fisher; L G Mitchell; W C Rodriquez; J J Canik; C R Merril; V W Weedn
Journal:  J Forensic Sci       Date:  1993-05       Impact factor: 1.832

9.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

10.  D1S80 typing of DNA from simulated forensic specimens.

Authors:  F S Baechtel; K W Presley; J B Smerick
Journal:  J Forensic Sci       Date:  1995-07       Impact factor: 1.832

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  47 in total

1.  The frequency of heteroplasmy in the HVII region of mtDNA differs across tissue types and increases with age.

Authors:  C D Calloway; R L Reynolds; G L Herrin; W W Anderson
Journal:  Am J Hum Genet       Date:  2000-03-17       Impact factor: 11.025

2.  A new database of mitochondrial DNA hypervariable regions I and II sequences from 162 Japanese individuals.

Authors:  K Imaizumi; T J Parsons; M Yoshino; M M Holland
Journal:  Int J Legal Med       Date:  2002-04       Impact factor: 2.686

3.  The making of the African mtDNA landscape.

Authors:  Antonio Salas; Martin Richards; Tomás De la Fe; María-Victoria Lareu; Beatriz Sobrino; Paula Sánchez-Diz; Vincent Macaulay; Angel Carracedo
Journal:  Am J Hum Genet       Date:  2002-10-22       Impact factor: 11.025

4.  Sequence polymorphisms within the human mitochondrial genes MTATP6, MTATP8 and MTND4.

Authors:  Sabine Lutz-Bonengel; Ulrike Schmidt; Tanja Schmitt; Stefan Pollak
Journal:  Int J Legal Med       Date:  2003-05-06       Impact factor: 2.686

5.  A compositional segmentation of the human mitochondrial genome is related to heterogeneities in the guanine mutation rate.

Authors:  David C Samuels; Richard J Boys; Daniel A Henderson; Patrick F Chinnery
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

6.  Mitochondrial DNA control region sequences from Nairobi (Kenya): inferring phylogenetic parameters for the establishment of a forensic database.

Authors:  Anita Brandstätter; Christine T Peterson; Jodi A Irwin; Solomon Mpoke; Davy K Koech; Walther Parson; Thomas J Parsons
Journal:  Int J Legal Med       Date:  2004-10       Impact factor: 2.686

7.  Mitochondrial DNA CA dinucleotide repeats in Koreans: the presence of length heteroplasmy.

Authors:  Ukhee Chung; Hwan Young Lee; Ji-Eun Yoo; Myung Jin Park; Kyoung-Jin Shin
Journal:  Int J Legal Med       Date:  2004-09-17       Impact factor: 2.686

8.  Multiplex mutagenically separated polymerase chain reaction assay for rapid detection of human mitochondrial DNA variations in coding area.

Authors:  Jin Wu; Peng Ran; Beilei Zhang; Yingbi Li; Jing Yan; Miao Liao; Yiping Hou; Lin Zhang
Journal:  Croat Med J       Date:  2008-02       Impact factor: 1.351

9.  A simple method of genomic DNA extraction from human samples for PCR-RFLP analysis.

Authors:  Souvik Ghatak; Rajendra Bose Muthukumaran; Senthil Kumar Nachimuthu
Journal:  J Biomol Tech       Date:  2013-12

10.  Automating the identification of DNA variations using quality-based fluorescence re-sequencing: analysis of the human mitochondrial genome.

Authors:  M J Rieder; S L Taylor; V O Tobe; D A Nickerson
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

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