Literature DB >> 8122998

Four polymorphic markers on rat chromosome 12 form a single linkage group.

P Mathern1, E A Goldmuntz, H Zha, Y Du, L J Crofford, R L Wilder, E F Remmers.   

Abstract

Four PCR-typable polymorphic markers were mapped to rat chromosome 12 by linkage analysis of F2 intercross progeny of Fischer (F344/N) and Lewis (LEW/N) rat strains. The markers formed a single linkage group, covering 27.7 cM, with the following order and distance between markers: plasminogen activator inhibitor (Planh)--0.0 cM--phosphoenolpyruvate carboxykinase-related sequence 2 (Pepckr2)--15.4 cM--anonymous marker (D12N155)--12.3 cM--serine dehydratase (Sdh). All markers were identified and genotyped by PCR analysis of simple sequence repeats. The gene encoding Planh was previously assigned to rat chromosome 12, which allowed us to assign the entire linkage group to this chromosome. These markers were highly polymorphic in 13 additional inbred rat strains (BUF/N, BN/SsN, WKY/N, MNR/N, LER/N, WBB1/N, WBB2/N, MR/N, LOU/MN, SHR/N, ACI/N, SR/Jr, and SS/Jr). These markers should be useful tools for further genetic studies in rats.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8122998     DOI: 10.1007/bf02396228

Source DB:  PubMed          Journal:  Biochem Genet        ISSN: 0006-2928            Impact factor:   1.890


  12 in total

1.  A second-generation linkage map of the human genome.

Authors:  J Weissenbach; G Gyapay; C Dib; A Vignal; J Morissette; P Millasseau; G Vaysseix; M Lathrop
Journal:  Nature       Date:  1992-10-29       Impact factor: 49.962

2.  A computer program for selection of oligonucleotide primers for polymerase chain reactions.

Authors:  T Lowe; J Sharefkin; S Q Yang; C W Dieffenbach
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

3.  Computerized estimation of size of nucleic acid fragments using the four-parameter logistic model.

Authors:  K E Oerter; P J Munson; W O McBride; D Rodbard
Journal:  Anal Biochem       Date:  1990-09       Impact factor: 3.365

4.  Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction.

Authors:  J L Weber; P E May
Journal:  Am J Hum Genet       Date:  1989-03       Impact factor: 11.025

5.  Linkage map of 10 polymorphic markers on rat chromosome 2.

Authors:  H Zha; R L Wilder; E A Goldmuntz; J M Cash; L J Crofford; P Mathern; E F Remmers
Journal:  Cytogenet Cell Genet       Date:  1993

6.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

7.  The gene map of the Norway rat (Rattus norvegicus) and comparative mapping with mouse and man.

Authors:  G Levan; J Szpirer; C Szpirer; K Klinga; C Hanson; M Q Islam
Journal:  Genomics       Date:  1991-07       Impact factor: 5.736

8.  Chromosomal mapping of two genetic loci associated with blood-pressure regulation in hereditary hypertensive rats.

Authors:  P Hilbert; K Lindpaintner; J S Beckmann; T Serikawa; F Soubrier; C Dubay; P Cartwright; B De Gouyon; C Julier; S Takahasi
Journal:  Nature       Date:  1991-10-10       Impact factor: 49.962

9.  Chromosomal localization in man and rat of the genes encoding the liver-enriched transcription factors C/EBP, DBP, and HNF1/LFB-1 (CEBP, DBP, and transcription factor 1, TCF1, respectively) and of the hepatocyte growth factor/scatter factor gene (HGF).

Authors:  C Szpirer; M Riviere; R Cortese; T Nakamura; M Q Islam; G Levan; J Szpirer
Journal:  Genomics       Date:  1992-06       Impact factor: 5.736

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

View more
  1 in total

1.  Correlation between genetic and cytogenetic maps of the rat.

Authors:  Y Andoh; T Kuramoto; N Yokoi; T Maihara; K Kitada; T Serikawa
Journal:  Mamm Genome       Date:  1998-04       Impact factor: 2.957

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.