Literature DB >> 8113163

Comparison of plasmid DNA topology among mesophilic and thermophilic eubacteria and archaebacteria.

F Charbonnier1, P Forterre.   

Abstract

Several plasmid DNAs have been isolated from mesophilic and thermophilic archaebacteria. Their superhelical densities were estimated at their host strain's optimal growth temperature, and in some representative strains, the presence of reverse gyrase activity (positive DNA supercoiling) was investigated. We show here that these plasmids can be grouped in two clusters with respect to their topological state. The group I plasmids have a highly negatively supercoiled DNA and belong to the mesophilic archaebacteria and all types of eubacteria. The group II plasmids have DNA which is close to the relaxed state and belong exclusively to the thermophilic archaebacteria. All archaebacteria containing a relaxed plasmid, with the exception of the moderately thermophilic methanogen Methanobacterium thermoautotrophicum Marburg, also exhibit reverse gyrase activity. These findings show that extrachromosomal DNAs with very different topological states coexist in the archaebacterial domain.

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Year:  1994        PMID: 8113163      PMCID: PMC205186          DOI: 10.1128/jb.176.5.1251-1259.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  37 in total

1.  Evidence that a plasmid from a hyperthermophilic archaebacterium is relaxed at physiological temperatures.

Authors:  F Charbonnier; G Erauso; T Barbeyron; D Prieur; P Forterre
Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

2.  Bacterial DNA supercoiling and [ATP]/[ADP] ratio: changes associated with salt shock.

Authors:  L S Hsieh; J Rouviere-Yaniv; K Drlica
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

3.  Reverse gyrase, a hallmark of the hyperthermophilic archaebacteria.

Authors:  C Bouthier de la Tour; C Portemer; M Nadal; K O Stetter; P Forterre; M Duguet
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

Review 4.  Structure and reactions of closed duplex DNA.

Authors:  W R Bauer
Journal:  Annu Rev Biophys Bioeng       Date:  1978

Review 5.  Recent studies of DNA topoisomerases.

Authors:  J C Wang
Journal:  Biochim Biophys Acta       Date:  1987-06-06

6.  Induction of anaerobic gene expression in Rhodobacter capsulatus is not accompanied by a local change in chromosomal supercoiling as measured by a novel assay.

Authors:  D N Cook; G A Armstrong; J E Hearst
Journal:  J Bacteriol       Date:  1989-09       Impact factor: 3.490

7.  Genetic transfer in Halobacterium volcanii.

Authors:  M Mevarech; R Werczberger
Journal:  J Bacteriol       Date:  1985-04       Impact factor: 3.490

8.  The helical repeat of DNA at high temperature.

Authors:  M Duguet
Journal:  Nucleic Acids Res       Date:  1993-02-11       Impact factor: 16.971

9.  Plasmid DNA from the acetotrophic methanogen Methanosarcina acetivorans.

Authors:  K R Sowers; R P Gunsalus
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

10.  Archaebacterial heat-shock proteins.

Authors:  C J Daniels; A H McKee; W F Doolittle
Journal:  EMBO J       Date:  1984-04       Impact factor: 11.598

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  31 in total

1.  An abundant DNA binding protein from the hyperthermophilic archaeon Sulfolobus shibatae affects DNA supercoiling in a temperature-dependent fashion.

Authors:  H Xue; R Guo; Y Wen; D Liu; L Huang
Journal:  J Bacteriol       Date:  2000-07       Impact factor: 3.490

2.  Plasmid pGS5 from the hyperthermophilic archaeon Archaeoglobus profundus is negatively supercoiled.

Authors:  P López-García; P Forterre; J van der Oost; G Erauso
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

3.  Speculations on the origin of life and thermophily: review of available information on reverse gyrase suggests that hyperthermophilic procaryotes are not so primitive.

Authors:  P Forterre; F Confalonieri; F Charbonnier; M Duguet
Journal:  Orig Life Evol Biosph       Date:  1995-06       Impact factor: 1.950

4.  Characterization of pURB500 from the archaeon Methanococcus maripaludis and construction of a shuttle vector.

Authors:  D L Tumbula; T L Bowen; W B Whitman
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

5.  Structural analysis of DNA sequence: evidence for lateral gene transfer in Thermotoga maritima.

Authors:  P Worning; L J Jensen; K E Nelson; S Brunak; D W Ussery
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

Review 6.  Cellulase, clostridia, and ethanol.

Authors:  Arnold L Demain; Michael Newcomb; J H David Wu
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

7.  Transcriptional Repressor TrmBL2 from Thermococcus kodakarensis Forms Filamentous Nucleoprotein Structures and Competes with Histones for DNA Binding in a Salt- and DNA Supercoiling-dependent Manner.

Authors:  Artem K Efremov; Yuanyuan Qu; Hugo Maruyama; Ci J Lim; Kunio Takeyasu; Jie Yan
Journal:  J Biol Chem       Date:  2015-04-30       Impact factor: 5.157

8.  Characterization of the reverse gyrase from the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  K M Borges; A Bergerat; A M Bogert; J DiRuggiero; P Forterre; F T Robb
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

Review 9.  The linkage between reverse gyrase and hyperthermophiles: a review of their invariable association.

Authors:  Michelle Heine; Sathees B C Chandra
Journal:  J Microbiol       Date:  2009-06-26       Impact factor: 3.422

10.  Temperature, template topology, and factor requirements of archaeal transcription.

Authors:  S D Bell; C Jaxel; M Nadal; P F Kosa; S P Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

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