Literature DB >> 10940047

Plasmid pGS5 from the hyperthermophilic archaeon Archaeoglobus profundus is negatively supercoiled.

P López-García1, P Forterre, J van der Oost, G Erauso.   

Abstract

We present evidence that, in contrast to plasmids from other hyperthermophilic archaea, which are in the relaxed to positively supercoiled state, plasmid pGS5 (2.8 kb) from Archaeoglobus profundus is negatively supercoiled. This might be due to the presence of a gyrase introducing negative supercoils, since gyrase genes are present in the genome of its close relative A. fulgidus, and suggests that gyrase activity predominates over reverse gyrase whenever the two topoisomerases coexist in cells.

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Year:  2000        PMID: 10940047      PMCID: PMC111383          DOI: 10.1128/JB.182.17.4998-5000.2000

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  12 in total

1.  Negative constrained DNA supercoiling in archaeal nucleosomes.

Authors:  D Musgrave; P Forterre; A Slesarev
Journal:  Mol Microbiol       Date:  2000-01       Impact factor: 3.501

2.  Evidence that a plasmid from a hyperthermophilic archaebacterium is relaxed at physiological temperatures.

Authors:  F Charbonnier; G Erauso; T Barbeyron; D Prieur; P Forterre
Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

3.  Conformational fluctuations of DNA helix.

Authors:  D E Depew; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1975-11       Impact factor: 11.205

4.  DNA topology in hyperthermophilic archaea: reference states and their variation with growth phase, growth temperature, and temperature stresses.

Authors:  P López-García; P Forterre
Journal:  Mol Microbiol       Date:  1997-03       Impact factor: 3.501

5.  The helical repeat of DNA at high temperature.

Authors:  M Duguet
Journal:  Nucleic Acids Res       Date:  1993-02-11       Impact factor: 16.971

6.  Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis.

Authors:  W Keller
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205

7.  Control of DNA topology during thermal stress in hyperthermophilic archaea: DNA topoisomerase levels, activities and induced thermotolerance during heat and cold shock in Sulfolobus.

Authors:  P López-García; P Forterre
Journal:  Mol Microbiol       Date:  1999-08       Impact factor: 3.501

8.  The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.

Authors:  H P Klenk; R A Clayton; J F Tomb; O White; K E Nelson; K A Ketchum; R J Dodson; M Gwinn; E K Hickey; J D Peterson; D L Richardson; A R Kerlavage; D E Graham; N C Kyrpides; R D Fleischmann; J Quackenbush; N H Lee; G G Sutton; S Gill; E F Kirkness; B A Dougherty; K McKenney; M D Adams; B Loftus; S Peterson; C I Reich; L K McNeil; J H Badger; A Glodek; L Zhou; R Overbeek; J D Gocayne; J F Weidman; L McDonald; T Utterback; M D Cotton; T Spriggs; P Artiach; B P Kaine; S M Sykes; P W Sadow; K P D'Andrea; C Bowman; C Fujii; S A Garland; T M Mason; G J Olsen; C M Fraser; H O Smith; C R Woese; J C Venter
Journal:  Nature       Date:  1997-11-27       Impact factor: 49.962

9.  Both DNA gyrase and reverse gyrase are present in the hyperthermophilic bacterium Thermotoga maritima.

Authors:  O Guipaud; E Marguet; K M Noll; C B de la Tour; P Forterre
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-30       Impact factor: 11.205

Review 10.  The unique DNA topology and DNA topoisomerases of hyperthermophilic archaea.

Authors:  P Forterre; A Bergerat; P Lopez-Garcia
Journal:  FEMS Microbiol Rev       Date:  1996-05       Impact factor: 16.408

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  15 in total

1.  Separate and combined biochemical activities of the subunits of a naturally split reverse gyrase.

Authors:  Christopher Capp; Yushen Qian; Harvey Sage; Harald Huber; Tao-Shih Hsieh
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

Review 2.  The linkage between reverse gyrase and hyperthermophiles: a review of their invariable association.

Authors:  Michelle Heine; Sathees B C Chandra
Journal:  J Microbiol       Date:  2009-06-26       Impact factor: 3.422

3.  Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

4.  Increase of positive supercoiling in a hyperthermophilic archaeon after UV irradiation.

Authors:  A Gorlas; R Catchpole; E Marguet; P Forterre
Journal:  Extremophiles       Date:  2018-11-22       Impact factor: 2.395

Review 5.  The enigmatic archaeal virosphere.

Authors:  David Prangishvili; Dennis H Bamford; Patrick Forterre; Jaime Iranzo; Eugene V Koonin; Mart Krupovic
Journal:  Nat Rev Microbiol       Date:  2017-11-10       Impact factor: 60.633

6.  Living side by side with a virus: characterization of two novel plasmids from Thermococcus prieurii, a host for the spindle-shaped virus TPV1.

Authors:  Aurore Gorlas; Mart Krupovic; Patrick Forterre; Claire Geslin
Journal:  Appl Environ Microbiol       Date:  2013-04-12       Impact factor: 4.792

7.  Helical chirality: a link between local interactions and global topology in DNA.

Authors:  Youri Timsit; Péter Várnai
Journal:  PLoS One       Date:  2010-02-19       Impact factor: 3.240

8.  Bipartite Network Analysis of the Archaeal Virosphere: Evolutionary Connections between Viruses and Capsidless Mobile Elements.

Authors:  Jaime Iranzo; Eugene V Koonin; David Prangishvili; Mart Krupovic
Journal:  J Virol       Date:  2016-11-28       Impact factor: 5.103

9.  DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus.

Authors:  Alessandra Napoli; Yvan Zivanovic; Chantal Bocs; Cyril Buhler; Mose' Rossi; Patrick Forterre; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2002-06-15       Impact factor: 16.971

Review 10.  Phylogenomics of DNA topoisomerases: their origin and putative roles in the emergence of modern organisms.

Authors:  Patrick Forterre; Danièle Gadelle
Journal:  Nucleic Acids Res       Date:  2009-02-09       Impact factor: 16.971

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